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Job DescriptionP27240
Confidence99.95%DateThu Jan 5 11:43:19 GMT 2012
Rank13Aligned Residues179
% Identity12%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90.........100........
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Query Sequence  LSYNINIIKVFRSIDDTKVMLIDTDYGKLILKVFSPKVKRNERFFKSLLKGDYYERLFEQTQKVRNEGLNTLNDFYLLAE
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Template Sequence  FTEEYQLFEELGKGSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK. . . . . . . . . . . . . . . LEREARICRLLKHPNIVRL
Template Known Secondary structure 

TTTTS
S
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BTTB

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   910.........20.........30.........40.........50.... .....60.........70...
 
   109110.........120.........130... ......140.........150.........160.........170 ......
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Query Sequence  RKTLRFVHTYIMIIEYIDGIELCDM. . . . . . . . PDIDDALKNKIQQSINALHQHGMVSGDPHRGNFIIKN. . . . GEVRII
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Template Sequence  HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLA
Template Known Secondary structure 
SS


B

B
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TT
B



SSTTSBSSTT


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   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   177..180.........190........ .200.........210.........220..
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Query Sequence  DLSGKRASAQRKAKDRIDLERH. . . . . . . . . . . . YGIKNEIRDLGYYLLVYRKKMRNF
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Template Sequence  DFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF
Template Known Secondary structure 

SS
B


TT

B


S
S
GGG

TT

B
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S
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   156...160.........170.........180.........190.........200.........210...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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