Job Description P27240 Confidence 98.48% Date Thu Jan 5 11:43:19 GMT 2012 Rank 277 Aligned Residues 132 % Identity 21% Template c3ovcA_ PDB info PDB header:transferase/antibiotic Chain: A: PDB Molecule:hygromycin-b 4-o-kinase; PDBTitle: crystal structure of aminoglycoside phosphotransferase aph(4)-ia Resolution 1.95 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	V	F	R	S	I	D	D	T	K	V	M	L	I	D	T	D	Y	G	K	L	I	L	K	V	F	S	P	K	V	K	R	N	E	R	F	F	K	S	L	L	K	G	D	Y	Y	E	R	L	F	E	Q	T	Q	K	V	R	N	E	G	L	N	T	L	N	D	F	Y	L	L	A	E	R	K	T	L	R	F	V
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Sequence		L	X	Q	L	S	E	G	E	E	S	R	A	F	S	F	D	V	G	G	R	G	Y	V	L	R	V	N	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	A	D	G	F	Y	K	D	R	Y	V	Y	R	H	F	A	S	A	A	L	P	I	P	E	V	L	.	.	.	.	.	D	I	G	E	F	S	E
Template Known Secondary structure									S	S									T	T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		S	S	S							.	.	.	.	.					S	S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.															.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.						.	80	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																				.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	T	Y	I	M	I	I	E	Y	I	D	G	I	E	L	C	D	M	.	P	D	I	D	D	A	L	K	N	K	I	Q	Q	S	I	N	A	L	H	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	T	Y	C	I	S	R	R	A	Q	G	V	T	L	Q	D	L	P	E	T	E	L	P	A	V	L	Q	P	V	A	E	A	X	D	A	I	A	A	A	D	L	S	Q	T	S	G	F	G	P	F	G	P	Q	G	I	G	Q	Y	T	T	W	R	D	F	I	C	A	I	A	D	P	H	V	Y	H	W	Q	T	V
Template Known Secondary structure		S											S			T	T	T	S		G	G	G	S	G	G	G																	T	T		B							T	T	S	B				S	S							G	G	G		T	T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
																												154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	M	V	S	G	D	P	H	R	G	N	F	I	I	K	N	G	E	V	.	R	I	I	D	L	S	G	K	R	A	S	A	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		X	D	D	T	V	S	A	S	V	A	Q	A	L	D	E	L	X	L	W	A	E	D	C	P	E	V	R	H	L	V	H	A	D	F	G	S	N	N	V	L	T	D	N	G	R	I	T	A	V	I	D	W	S	E	A	X	F	G	D	S
Template Known Secondary structure				T	T	T															G	G	G										S	S		S	S	T	T					T	T									T	T						T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions