Job Description P27240 Confidence 99.49% Date Thu Jan 5 11:43:19 GMT 2012 Rank 226 Aligned Residues 159 % Identity 18% Template c3kn5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribosomal protein s6 kinase alpha-5; PDBTitle: crystal structure of the c-terminal kinase domain of msk1 in complex2 with amp-pnp Resolution 2.40 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	F	R	S	I	D	D	T	K	V	M	L	I	D	T	D	Y	G	K	L	I	L	K	V	F	S	P	K	V	K	R	N	E	R	F	F	K	S	L	L	K	G	D	Y	Y	E	R	L	F	E	Q	T	Q	K	V	R	N	E	G	L	N	T	L	N	D	F	Y	L	L	A	E	R	K	T	L	R	F	V	H
Query Conservation
Alig confidence																																.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	P	L	G	E	G	S	F	S	I	C	R	K	C	V	H	K	K	S	N	Q	A	F	A	V	K	I	I	S	K	.	.	.	.	R	M	E	A	N	T	Q	K	E	I	T	A	L	K	L	C	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	N	I	V	K	L	H	E	V	F	H	D	Q	L
Template Known Secondary structure				S	B			T	T									T	T	T	T										G	.	.	.	.	G	G														T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	B										S	S
Template Predicted Secondary structure																																.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.					460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.														.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.									.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.
Query Sequence		T	Y	I	M	I	I	E	Y	I	D	G	I	E	L	C	D	M	.	.	.	.	.	.	.	.	P	D	I	D	D	A	L	K	N	K	I	Q	Q	S	I	N	A	L	H	Q	H	G	M	V	S	G	D	P	H	R	G	N	F	I	I	K	N	G	E	V	R	I	I	D	L	S	G	K	R	A	S	A	Q	R	K
Query Conservation																			.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		H	T	F	L	V	M	E	L	L	N	G	G	E	L	F	E	R	I	K	K	K	K	H	F	S	E	T	E	A	S	Y	I	M	R	K	L	V	S	A	V	S	H	M	H	D	V	G	V	V	H	R	D	L	K	P	E	N	L	L	F	T	D	L	E	I	K	I	I	D	F	G	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												S		B							T		S			B																					T	T								G	G	G														T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	D	R	I	D	L	E	R	H	Y	G	I	K	N	E	I	R	D	L	G	Y	Y	L	L	V	Y	R	K	K	M	R	N	F
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	F	A	R	L	K	P	P	N	G	Y	D	E	S	C	D	L	W	S	L	G	V	I	L	Y	T	M	L	S	G	Q	V	P	F
Template Known Secondary structure		.	T											T																	S			T	T
Template Predicted Secondary structure		.
Template SS confidence
			568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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