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Job DescriptionP27240
Confidence99.72%DateThu Jan 5 11:43:19 GMT 2012
Rank180Aligned Residues181
% Identity17%Templatec3hkoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase with a kinase PDBTitle: crystal structure of a cdpk kinase domain from cryptosporidium parvum,2 cgd7_40
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90.........100........
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Query Sequence  LSYNINIIKVFRSIDDTKVMLIDTDYGKLILKVFSPKVKRNERFFKSLLKGDYYERLFEQTQKVRNEGLNTLNDFYLLAE
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Template Sequence  LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKI. . . . . . . . . . . . . MNKNKIRQKDVERIKTEVRLMKKLHHPNIARL
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SS
TTT

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TTB

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   6...10.........20.........30.........40 .........50.........60.........70..
 
   109110.........120.........130..... ....140..
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Query Sequence  RKTLRFVHTYIMIIEYIDGIELCDMPD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IDDALKN
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Template Sequence  YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIFRESLDFVQREKLISNIMR
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   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   143......150.........160......... 170.........180.........190..... ....200.........
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Query Sequence  KIQQSINALHQHGMVSGDPHRGNFIIK. . . NGEVRIIDLSGKRASAQRKAKDRIDL. . . . . . . . . . ERHYGIKNEIRDLG
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Template Sequence  QIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGAGTPYFVAPEVLNTTNESYGPKCDAWSAG
Template Known Secondary structure  TT




GGGS
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TT
GGGTT




GGG

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T
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   158.160.........170.........180.........190.........200.........210.........220.........230.......
 
   210.........220..
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Query Sequence  YYLLVYRKKMRNF
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Template Sequence  VLLHLLLMGAVPF
Template Known Secondary structure  SS
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   246...250........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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