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Job DescriptionP27240
Confidence99.61%DateThu Jan 5 11:43:19 GMT 2012
Rank212Aligned Residues162
% Identity17%Templatec3famA_
PDB info PDB header:transferaseChain: A: PDB Molecule:carbon catabolite-derepressing protein kinase; PDBTitle: crystal structure of the protein kinase domain of yeast amp-2 activated protein kinase snf1
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40. ........50.........60.........70.........80.........90.........100.........110....
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Query Sequence  IKVFRS. IDDTKVMLIDTDYGKLILKVFSPKVKRNERFFKSLLKGDYYERLFEQTQKVRNEGLNTLNDFYLLAERKTLRF
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Template Sequence  GAHIGNYQIVKKVKLAYHTTTGQKVALKIINKKVMQGRIER. . . . . . . . . . . . . . . . . EISYLRLLRHPHIIKLYDVIKS
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Query Sequence  VHTYIMIIEYIDG. . . . . . . IELCDMPDIDDALKNKIQQSINALHQHGMVSGDPHRGNFIIK. NGEVRIIDLSGKRASAQ
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Template Sequence  KDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFG. . . . . . .
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   125....130.........140.........150.........160.........170.........180.........190.......
 
   187..190.........200.........210.........220..
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Query Sequence  RKAKDRIDLERHYGIKNEIRDLGYYLLVYRKKMRNF
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Template Sequence  . LSPNYAAPEVISGPEVDVWSCGVILYVMLCRRLPF
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   198.200.........210.........220.........230..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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