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Job DescriptionP27240
Confidence99.90%DateThu Jan 5 11:43:19 GMT 2012
Rank58Aligned Residues187
% Identity19%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SYNINIIKVFRSIDDTKVMLIDTDYGKLILKVFSPKVKRNERFFKSLLKGDYYERLFEQTQKVRNEGLNTLNDFYLLAER
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Template Sequence  NYRTDMVEVNWIGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIR. . . . . . . . . KSRTAREARYLALVKDFGIPAPY
Template Known Secondary structure  T

GGGS






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Query Sequence  KTLRFVHTYIMIIEYIDGIELCDMPDIDDALKNKIQQSINALHQHGMVSGDPHRGNFIIKNGEVRIIDLSGKRA. . SAQR
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Template Sequence  IFDVDLDNKRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF. DKDLYIIDFGLGKISNLDED
Template Known Secondary structure  TTTT


SGGGTTTT
TT
S


GGG.SSS


TT



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   401........410.........420.........430.........440.........450......... 460.........470.........
 
   188.190....... ..200.........210.........220......
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Query Sequence  KAKDRIDLER. . . . . HYGIKNEIRDLGYYLLVYRKKMRNFMRRL
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Template Sequence  KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILEL
Template Known Secondary structure 
TTT
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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