Job Description P27240 Confidence 99.80% Date Thu Jan 5 11:43:19 GMT 2012 Rank 144 Aligned Residues 179 % Identity 12% Template c3d4qA_ PDB info PDB header:transferase Chain: A: PDB Molecule:b-raf proto-oncogene serine/threonine-protein kinase; PDBTitle: pyrazole-based inhibitors of b-raf kinase Resolution 2.80 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	L	S	Y	N	I	N	I	I	K	V	F	R	S	I	D	D	T	K	V	M	L	I	D	T	D	Y	G	K	L	I	L	K	V	F	S	P	K	V	K	R	N	E	R	F	F	K	S	L	L	K	G	D	Y	Y	E	R	L	F	E	Q	T	Q	K	V	R	N	E	G	L	N	T	L	N	D	F	Y	L	L
Query Conservation
Alig confidence																															.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	P	D	G	Q	I	T	V	G	Q	R	I	G	S	G	S	F	G	T	V	Y	K	G	K	W	H	G	D	.	.	V	A	V	K	M	L	N	V	T	A	P	T	P	Q	Q	L	Q	A	F	K	N	E	V	G	V	L	R	K	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	N	I	L
Template Known Secondary structure		B			T	T												T	T								S	S	S		.	.								S	S	S																	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	B
Template Predicted Secondary structure																															.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.			480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.															510	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.										.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																																					.
Query SS confidence																													.	.	.	.	.	.	.	.	.																																					.
Query Sequence		A	E	R	K	T	L	R	F	V	H	T	Y	I	M	I	I	E	Y	I	D	G	I	E	L	C	D	M	.	.	.	.	.	.	.	.	.	P	D	I	D	D	A	L	K	N	K	I	Q	Q	S	I	N	A	L	H	Q	H	G	M	V	S	G	D	P	H	R	G	N	F	I	I	K	.	N	G	E	V	R	I	I
Query Conservation																													.	.	.	.	.	.	.	.	.																																					.
Alig confidence						.																							.	.	.	.	.	.	.	.	.																																					.
Template Conservation						.
Template Sequence		L	F	M	G	.	Y	S	T	K	P	Q	L	A	I	V	T	Q	W	C	E	G	S	S	L	Y	H	H	L	H	I	I	E	T	K	F	E	M	I	K	L	I	D	I	A	R	Q	T	A	Q	G	M	D	Y	L	H	A	K	S	I	I	H	R	D	L	K	S	N	N	I	F	L	H	E	D	L	T	V	K	I	G
Template Known Secondary structure						.				S	S	S									S	S		B							T	S																										T	T		B		S			S	G	G	G					T	T	T
Template Predicted Secondary structure						.
Template SS confidence
		515	.	.	.		.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
		177	.	.	180	.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure											.	.	.														.	.
Query SS confidence											.	.	.														.	.
Query Sequence		D	L	S	G	K	R	A	S	A	.	.	.	Q	R	K	A	K	D	R	I	D	L	E	R	H	.	.	Y	G	I	K	N	E	I	R	D	L	G	Y	Y	L	L	V	Y	R	K	K	M	R	N	F
Query Conservation											.	.	.														.	.
Alig confidence											.	.	.														.	.
Template Conservation
Template Sequence		D	F	G	L	A	T	V	L	S	G	S	I	L	W	M	A	P	E	V	I	R	M	Q	D	K	N	P	Y	S	F	Q	S	D	V	Y	A	F	G	I	V	L	Y	E	L	M	T	G	Q	L	P	Y
Template Known Secondary structure				T	T		B							T	T							T	T		S	S				S																		S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions