Job Description P27240 Confidence 99.90% Date Thu Jan 5 11:43:19 GMT 2012 Rank 57 Aligned Residues 191 % Identity 17% Template c2v62A_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase vrk2; PDBTitle: structure of vaccinia-related kinase 2 Resolution 1.7 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	K	V	F	R	S	I	D	D	T	K	V	M	L	I	D	T	D	Y	G	K	L	I	L	K	V	F	S	P	K	V	K	R	N	E	R	F	F	K	S	L	L	K	G	D	Y	Y	E	R	L	F	E	Q	T	Q	K	V	R	N	E	G	L	N	T	L	N	D	F	Y	L	L	A	E	R	K	T	L	R	F
Query Conservation
Alig confidence																																																														.	.
Template Conservation																																																														.	.
Template Sequence		E	G	N	Q	W	V	L	G	K	K	I	L	I	Y	L	A	F	P	T	N	K	P	E	K	D	A	R	H	V	V	K	V	E	Y	Q	E	G	P	L	F	S	E	L	K	F	Y	Q	R	V	A	K	K	D	C	I	K	K	W	I	E	.	.	R	K	Q	L	D	Y	L	G	I	P	L	F	Y	G	S	G	L	T
Template Known Secondary structure		T	S																	S	S	S		G	G	G																																				.	.			T		S
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		115	.	.					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.									.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.																	.	.	.	.	.	.	.	.																																					.	.	.
Query SS confidence					.	.	.	.																	.	.	.	.	.	.	.	.																																					.	.	.
Query Sequence		V	H	T	.	.	.	.	Y	I	M	I	I	E	Y	I	D	G	I	E	L	C	D	M	.	.	.	.	.	.	.	.	P	D	I	D	D	A	L	K	N	K	I	Q	Q	S	I	N	A	L	H	Q	H	G	M	V	S	G	D	P	H	R	G	N	F	I	I	K	.	.	.	N	G	E	V	R	I	I	D	L	S
Query Conservation					.	.	.	.																	.	.	.	.	.	.	.	.																																					.	.	.
Alig confidence					.	.	.	.									.								.	.	.	.	.	.	.	.																																					.	.	.
Template Conservation																	.
Template Sequence		E	F	K	G	R	S	Y	R	F	M	V	M	E	R	L	.	G	I	D	L	Q	K	I	S	G	Q	N	G	T	F	K	K	S	T	V	L	Q	L	G	I	R	M	L	D	V	L	E	Y	I	H	E	N	E	Y	V	H	G	D	I	K	A	A	N	L	L	L	G	Y	K	N	P	D	Q	V	Y	L	A	D	Y	G
Template Known Secondary structure			S	S	S												.									B	G	G	G	B																							T	T				S			S	G	G	G					S	S	S	T	T	S							T
Template Predicted Secondary structure																	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.																.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Query Sequence		G	K	R	A	S	A	Q	R	K	A	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	D	L	E	R	H	.	.	.	.	Y	G	I	K	N	E	I	R	D	L	G	Y	Y	L	L	V	Y	R	K	K	M	R	N	F	M	R	R	L	K	G
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Template Conservation
Template Sequence		L	S	Y	R	Y	C	P	N	G	N	H	K	Q	Y	Q	E	N	P	R	K	G	H	N	G	T	I	E	F	T	S	L	D	A	H	K	G	V	A	L	S	R	R	S	D	V	E	I	L	G	Y	C	M	L	R	W	L	C	G	K	L	P	W	E	Q	N	L	K	D
Template Known Secondary structure		T				S	S	G	G	G									G	G	G		S		S		T	T	T								T																						S	S		T	T	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions