Job Description P27240 Confidence 99.39% Date Thu Jan 5 11:43:19 GMT 2012 Rank 242 Aligned Residues 169 % Identity 9% Template c2i6lB_ PDB info PDB header:transferase Chain: B: PDB Molecule:mitogen-activated protein kinase 6; PDBTitle: crystal structure of human mitogen activated protein kinase2 6 (mapk6) Resolution 2.25 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		F	R	S	I	D	D	T	K	V	M	L	I	D	T	D	Y	G	K	L	I	L	K	V	F	S	P	K	V	K	R	N	E	R	F	F	K	S	L	L	K	G	D	Y	Y	E	R	L	F	E	Q	T	Q	K	V	R	N	E	G	L	N	T	L	N	D	F	Y	L	L	A	E	R	K	T	L	R	F	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	P	L	G	N	G	L	V	F	S	A	V	D	N	D	C	D	K	R	V	A	I	K	K	I	V	L	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	S	V	K	H	A	L	R	E	I	K	I	I	R	R	L	D	H	D	N	I	V	K	V	F	E	I	L	G	P	S	G	S	Q
Template Known Secondary structure								T	T							T	T	T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T															T	T	B									S	S	S		B
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
			115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.							.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure		.																				.	.	.	.	.	.																																					.	.
Query SS confidence		.																				.	.	.	.	.	.																																					.	.
Query Sequence		.	V	H	T	Y	I	M	I	I	E	Y	I	D	G	I	E	L	C	D	M	.	.	.	.	.	.	P	D	I	D	D	A	L	K	N	K	I	Q	Q	S	I	N	A	L	H	Q	H	G	M	V	S	G	D	P	H	R	G	N	F	I	I	K	.	.	N	G	E	V	R	I	I	D	L	S	G	K	R	A	S	A
Query Conservation		.																				.	.	.	.	.	.																																					.	.
Alig confidence		.																				.	.	.	.	.	.																																					.	.
Template Conservation
Template Sequence		L	T	D	S	V	Y	I	V	Q	E	Y	M	E	T	D	L	A	N	V	L	E	Q	G	P	L	L	E	E	H	A	R	L	F	M	Y	Q	L	L	R	G	L	K	Y	I	H	S	A	N	V	L	H	R	D	L	K	P	A	N	L	F	I	N	T	E	D	L	V	L	K	I	G	D	F	H	L	S	E	G	L	V
Template Known Secondary structure																						T	T																									T	T				S			S	G	G	G					T	T	T	T										S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		186	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		Q	R	K	A	K	D	.	.	R	I	D	L	E	R	H	Y	G	I	K	N	E	I	R	D	L	G	Y	Y	L	L	V	Y	R	K	K	M	R	N	F
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		T	K	W	Y	R	S	P	R	L	L	L	S	P	N	N	Y	T	K	A	I	D	M	W	A	A	G	C	I	F	A	E	M	L	T	G	K	T	L	F
Template Known Secondary structure				T	T								S	T	T																					S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions