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Job DescriptionP27240
Confidence99.85%DateThu Jan 5 11:43:19 GMT 2012
Rank114Aligned Residues181
% Identity15%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90.........100........
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Query Sequence  LSYNINIIKVFRSIDDTKVMLIDTDYGKLILKVFSPKVKRNERFFKSLLKGDYYERLFEQTQKVRNEGLNTLNDFYLLAE
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Template Sequence  FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK. . . . . . . . . . . . . LEREARICRKLQHPNIVRL
Template Known Secondary structure 
TTTTTTTT


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TTB

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   910.........20.........30.........40.........50...... ...60.........70.....
 
   109110.........120.........130... ......140.........150.........160......... 170......
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Query Sequence  RKTLRFVHTYIMIIEYIDGIELCDM. . . . . . . . PDIDDALKNKIQQSINALHQHGMVSGDPHRGNFIIK. . . . NGEVRII
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Template Sequence  HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA
Template Known Secondary structure 
SS



S
BTT
S


TT
B



SGGGS
SSTT


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   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   177..180.........190......... 200.........210.........220..
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Query Sequence  DLSGKRASAQRKAKDRIDLERHY. . . . . . . . . . . GIKNEIRDLGYYLLVYRKKMRNF
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Template Sequence  DFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF
Template Known Secondary structure 

TT
B

TT

B


S
S
GGG

T

B
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SS
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   156...160.........170.........180.........190.........200.........210..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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