Job Description P27240 Confidence 99.65% Date Thu Jan 5 11:43:19 GMT 2012 Rank 206 Aligned Residues 202 % Identity 16% Template c1vzoA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal protein s6 kinase alpha 5; PDBTitle: the structure of the n-terminal kinase domain of msk12 reveals a novel autoinhibitory conformation for a dual3 kinase protein Resolution 1.8 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																															.	.	.														.	.	.
Query SS confidence																																															.	.	.														.	.	.
Query Sequence		K	D	L	V	V	F	T	D	E	N	N	S	K	Y	L	N	V	L	N	D	F	L	S	Y	N	I	N	I	I	K	V	F	R	S	I	D	D	T	K	V	M	L	I	D	T	.	.	.	D	Y	G	K	L	I	L	K	V	F	S	P	K	.	.	.	V	K	R	N	E	R	F	F	K	S	L	L	K	G	D	Y
Query Conservation																																															.	.	.														.	.	.
Alig confidence																																															.	.	.														.	.	.
Template Conservation
Template Sequence		Q	L	L	T	V	K	H	E	L	R	T	A	N	L	T	G	H	A	E	K	V	G	I	E	N	F	E	L	L	K	V	L	G	T	G	A	Y	G	K	V	F	L	V	R	K	I	S	G	H	D	T	G	K	L	Y	A	M	K	V	L	K	K	A	T	I	V	Q	K	A	K	T	T	E	H	T	R	T	E	R	Q
Template Known Secondary structure																S	S							G	G	G										T	T	T										S	S	T	T	T	T									S									S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.									.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.
Query Sequence		Y	E	R	L	F	E	Q	T	Q	K	V	R	N	E	G	L	N	T	L	N	D	F	Y	L	L	A	E	R	K	T	L	R	F	V	H	T	Y	I	M	I	I	E	Y	I	D	G	I	E	L	C	D	M	.	.	.	.	.	.	.	.	P	D	I	D	D	A	L	K	N	K	I	Q	Q	S	I	N	A	L	H	Q
Query Conservation																																																						.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	E	H	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	P	F	L	V	T	L	H	Y	A	F	Q	T	E	T	K	L	H	L	I	L	D	Y	I	N	G	G	E	L	F	T	H	L	S	Q	R	E	R	F	T	E	H	E	V	Q	I	Y	V	G	E	I	V	L	A	L	E	H	L	H	K
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	T		T	T	B										T	T											S		B									S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.														110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.													.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																		.																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	G	M	V	S	G	D	P	H	R	G	N	F	I	I	K	.	N	G	E	V	R	I	I	D	L	S	G	K	R	A	S	A	Q	R	K	A	K	D	R	I	D	L	E	R	H	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	I	K	N	E	I	R	D	L	G	Y	Y	L	L	V	Y	R	K	K	M	R
Query Conservation																		.																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	I	I	Y	R	D	I	K	L	E	N	I	L	L	D	S	N	G	H	V	V	L	T	D	F	G	L	S	K	E	F	V	A	D	E	T	E	R	A	Y	D	F	C	G	T	I	E	Y	M	A	P	D	I	V	R	G	G	D	D	K	A	V	D	W	W	S	L	G	V	L	M	Y	E	L	L	T	G	A	S
Template Known Secondary structure		T	T								G	G	G					T	T	S					S		S	S							G	G	G	G	G	G	G		G	G	G	S			T	T							T	T				T																	S	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		221	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	F
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		254	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions