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Job Description | P54745 | Confidence | 27.12% | Date | Thu Jan 5 12:06:03 GMT 2012 |
Rank | 115 | Aligned Residues | 74 |
% Identity | 22% | Template | c3chgB_ |
PDB info |
PDB header:ligand binding protein | Chain: B: PDB Molecule:glycine betaine-binding protein; |
PDBTitle: the compatible solute-binding protein opuac from bacillus2 subtilis in complex with dmsa
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Resolution | 2.80 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
D | E | I | R | A | R | I | Q | S | A | T | T | P | D | E | L | L | S | A | L | D | D | K | G | G | . |
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T | Q | P | S | A | S | F | S | N | A | P | T | I | V | C | V | T | A | C | P | A | G | I | A | H | T | Y | M | A | A | E | Y | L | E | K | A | G | R | K | L | G | V | N | V | Y | V | E | K | Q |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | E | I | M | I | K | V | E | E | G | E | K | P | A | K | V | A | A | E | Y | V | N | K | H | K | D | Q | I | A | E | W | T | K | G | V | Q | K | V | K | G | D | K | I | N | L | A | Y | V | A | W | D | S | E | I | A | S | T | N | V | I | G | K | V | L | E | D | . |
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L | G | Y | E | V | T | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | A | N | G | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | E | A | G | P |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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204 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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