Job Description P54745 Confidence 46.81% Date Thu Jan 5 12:06:03 GMT 2012 Rank 67 Aligned Residues 125 % Identity 17% Template c3c1iA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonia channel; PDBTitle: substrate binding, deprotonation and selectivity at the2 periplasmic entrance of the e. coli ammonia channel amtb Resolution 2.30 Å

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		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	L	I	V	A	G	G	T	V	L	A	V	A	V	L	L	S	Q	I	F	G	L	Q	D	L	F	N	E	E	N	S	W	L	W	M	Y	R	K	L	G	G	G	L	L	G	I	L	M	V	P	V	L	A	A	Y	T	A	Y	S	L	A	D	K	P	A	L	A	P	G	F	A	A	G	L	A	A	N	M	I
Query Conservation
Alig confidence																		.	.																															.
Template Conservation																		.	.																															.
Template Sequence		L	P	M	V	F	T	G	T	A	I	L	Y	I	G	W	F	.	.	G	A	N	A	G	S	A	G	T	A	N	E	I	A	A	L	A	F	V	N	T	V	V	A	T	A	A	A	I	L	.	G	W	I	F	G	E	W	A	L	R	G	K	P	S	L	L	G	A	C	S	G	A	I	A	G	L	V	G	V	T	P
Template Known Secondary structure																		.	.						T	T	S	S	S	S																				.											S	S																		T	T
Template Predicted Secondary structure																		.	.																															.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		398	.	400	.	.				.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		G	S	G	F	L	.	.	.	G	A	V	V	G	G	L	I	A	G	Y	L	M	R	W	V	K	N	H	L	R	L	S	S	K	F	N	G	F	L	T	F	Y	L	Y	P	V	L	G	T	L	G	A	G	S	L
Query Conservation							.	.	.
Alig confidence							.	.	.																.	.	.
Template Conservation																									.	.	.
Template Sequence		A	C	G	Y	I	G	V	G	G	A	L	I	I	G	V	V	A	G	L	A	G	L	W	.	.	.	G	V	T	M	D	D	P	C	D	V	F	G	V	H	G	V	C	G	I	V	G	C	I	M	T	G	I	F
Template Known Secondary structure		T	T	T	T	S																			.	.	.							G	G	G
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions