Return to main results Retrieve Phyre Job Id

Job DescriptionP54745
Confidence20.11%DateThu Jan 5 12:06:03 GMT 2012
Rank155Aligned Residues38
% Identity16%Templatec2kncA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:integrin alpha-iib; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   619620.........630........ .640.........650......
Predicted Secondary structure  ......








Query SS confidence 



















. . . . . .

















Query Sequence  AAIGWFGAALVGAAISTAIL. . . . . . LMWRRHAVKHGNYLTDGV
Query Conservation       

  


  
   
 ...... 
 

  


      
 
Alig confidence 



















......

















Template Conservation 
 



 
   




  
   
 
 




 

   

    
Template Sequence  PIWWVLVGVLGGLLLLTILVLAMWKVGFFKRNRPPLEEDDEEGE
Template Known Secondary structure 
TTTT

S



SSS

Template Predicted Secondary structure 









Template SS confidence 











































   965....970.........980.........990.........1000........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions