 |
Job Description | P54745 | Confidence | 47.24% | Date | Thu Jan 5 12:06:03 GMT 2012 |
Rank | 64 | Aligned Residues | 45 |
% Identity | 18% | Template | c1zj8B_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:probable ferredoxin-dependent nitrite reductase nira; |
PDBTitle: structure of mycobacterium tuberculosis nira protein
|
Resolution | 2.80 Å |
|
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | |
. | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | T | P | D | E | L | L | S | A | L | D | D | K | G | G | T | Q | P | S | A | S | F | S | N | A | P | T | I | . |
V | C | V | T | A | C | P | A | G | I | A | H | T | Y | M | A |
Query Conservation |   |
|   |
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |
|
|
|
|
|   |
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |
|
Template Sequence |   |
A | E | T | R | V | R | A | Q | H | L | V | P | E | L | E | R | R | L | E | D | I | N | S | Q | L | D | V | P | I | T | V | N | I | N | G | C | P | N | S | C | A | R | I | Q | I | A |
Template Known Secondary structure |   |
S | B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  | T | T |
|
| S |
|
|
|  |  |  |  | S | S | T | T |
| T | T |
| G | G | G | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
428 | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|