Job Description P36553 Confidence 100.00% Date Thu Jan 5 11:53:14 GMT 2012 Rank 1 Aligned Residues 297 % Identity 48% Template c2aexA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:coproporphyrinogen iii oxidase, mitochondrial; PDBTitle: the 1.58a crystal structure of human coproporphyrinogen oxidase2 reveals the structural basis of hereditary coproporphyria Resolution 1.58 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.																																																				.	.
Query SS confidence																												.																																																				.	.
Query Sequence		P	D	A	H	Q	V	K	Q	F	L	L	N	L	Q	D	T	I	C	Q	Q	L	T	A	V	D	G	.	A	E	F	V	E	D	S	W	Q	R	E	A	G	G	G	G	R	S	R	V	L	R	N	G	G	V	F	E	Q	A	G	V	N	F	S	H	V	H	G	E	A	M	P	A	S	A	T	A	H	R	P	.	.
Query Conservation																												.																																																				.	.
Alig confidence																												.																																																				.	.
Template Conservation
Template Sequence		D	M	K	T	K	M	E	L	L	I	L	E	T	Q	A	Q	V	C	Q	A	L	A	Q	V	D	G	G	A	N	F	S	V	D	R	W	E	R	K	E	G	G	G	G	I	S	C	V	L	Q	D	G	C	V	F	E	K	A	G	V	S	I	S	V	V	H	G	N	L	S	E	E	A	A	K	Q	M	R	S	R	G
Template Known Secondary structure		S																									T	T											T	T	T										S		S	S																										T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
							80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	E	L	A	G	R	S	F	E	A	M	G	V	S	L	V	V	H	P	H	N	P	Y	V	P	T	S	H	A	N	V	R	F	F	I	A	E	K	P	G	A	D	P	V	W	W	F	G	G	G	F	D	L	T	P	F	Y	G	F	E	E	D	A	I	H	W	H	R	T	A	R	D	L	C	L	P
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		K	V	L	K	T	K	D	G	K	L	P	F	C	A	M	G	V	S	S	V	I	H	P	K	N	P	H	A	P	T	I	H	F	N	Y	R	Y	F	E	V	E	E	A	D	G	N	K	Q	W	W	F	G	G	G	C	D	L	T	P	T	Y	L	N	Q	E	D	A	V	H	F	H	R	T	L	K	E	A	C	D	Q
Template Known Secondary structure							B	T	T	B															S	S	T	T	S															S	T	T															S	S																			T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	E	D	V	Y	P	R	Y	K	K	W	C	D	E	Y	F	Y	L	K	H	R	N	E	Q	R	G	I	G	G	L	F	F	D	D	L	N	T	P	D	F	D	R	C	F	A	F	M	Q	A	V	G	K	G	Y	T	D	A	Y	L	P	I	V	E	R	R	K	A	M	A	Y	G	E	R	E	R	N	F	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	G	P	D	L	Y	P	K	F	K	K	W	C	D	D	Y	F	F	I	A	H	R	G	E	R	R	G	I	G	G	I	F	F	D	D	L	D	S	P	S	K	E	E	V	F	R	F	V	Q	S	C	A	R	A	V	V	P	S	Y	I	P	L	V	K	K	H	C	D	D	S	F	T	P	Q	E	K	L	W	Q	Q
Template Known Secondary structure		T		T	T													T			G	G	G	T			S	S	S											S															T													T	T
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.
Predicted Secondary structure																									.																																						.
Query SS confidence																									.																																						.
Query Sequence		Y	R	R	G	R	Y	V	E	F	N	L	V	W	D	R	G	T	L	F	G	L	Q	T	.	G	G	R	T	E	S	I	L	M	S	M	P	P	L	V	R	W	E	Y	D	Y	Q	P	K	D	G	S	P	E	A	A	L	S	E	F	I	K	.	V	R	D	W	V
Query Conservation																									.																																						.
Alig confidence																									.																																						.
Template Conservation
Template Sequence		L	R	R	G	R	Y	V	E	F	N	L	L	Y	D	R	G	T	K	F	G	L	F	T	P	G	S	R	I	E	S	I	L	M	S	L	P	L	T	A	R	W	E	Y	M	H	S	P	S	E	N	S	K	E	A	E	I	L	E	V	L	R	H	P	R	D	W	V
Template Known Secondary structure																			T	T	G	G	G	S	S	S												S												T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions