Job Description P0AFU0 Confidence 3.31% Date Thu Jan 5 11:27:15 GMT 2012 Rank 46 Aligned Residues 82 % Identity 17% Template d2axtb1 SCOP info Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like Resolution 3.00

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	I	P	T	L	W	A	I	I	T	I	N	F	F	I	V	Q	I	A	P	G	G	P	V	D	Q	A	I	A	A	I	E	F	G	N	A	G	V	L	P	G	A	G	G	E	G	V	R	A	S	H	A	Q	T	G	V	G	N	I	S	D	S	N	Y	R	G	G	R	G	L	D	P	E	V	I	A	E	I	T
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	L	V	A	G	W	A	G	S	M	A	L	Y	E	L	A	T	F	D	P	S	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																		T	T				S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		H	R	Y	G	F	D	K	P	I	H	E	R	Y	F	K	M	L	W	D	Y	I	R	F	D	F	G	D	S	L	F	R	S	A	S	V	L	T	L	I	K	D	S	L	P	V	S	I	.	T	L	G	L	W	S	T	L	I	I	Y	L	V	S	I
Query Conservation																																																	.
Alig confidence		.	.	.	.																																												.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	V	L	N	P	M	W	R	Q	G	M	F	V	L	P	F	M	A	R	L	G	V	T	G	S	W	S	G	W	S	I	T	G	E	T	G	I	D	P	G	F	W	S	F	E	G	V	A	L	A	H	I	V	L	S	G	L	L	F	L
Template Known Secondary structure		.	.	.	.	T	T	S		G	G	G	G	T		S	S							T	T			B		T	T	S		B	T	T			T	T					S		S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions