Job Description P64521 Confidence 25.67% Date Thu Jan 5 12:09:08 GMT 2012 Rank 1 Aligned Residues 64 % Identity 20% Template c3pa8A_ PDB info PDB header:toxin/peptide inhibitor Chain: A: PDB Molecule:toxin b; PDBTitle: structure of the c. difficile tcdb cysteine protease domain in complex2 with a peptide inhibitor Resolution 2.00 Å

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		9	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.																																.	.	.	30	.					.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.
Predicted Secondary structure											.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.						.	.	.	.
Query SS confidence											.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.						.	.	.	.
Query Sequence		A	M	R	I	H	Q	Q	H	P	.	T	S	R	L	F	P	F	C	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	Y	R	W	.	.	.	.	H	G	S	A	E	.	.	.	.	A	Y	T	G	R	E	V	Q	D	I	P	G
Query Conservation											.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.						.	.	.	.
Alig confidence											.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.						.	.	.	.
Template Conservation
Template Sequence		A	C	N	L	F	A	K	T	P	Y	D	S	V	L	F	Q	K	N	I	E	D	S	E	I	A	Y	Y	Y	N	P	G	D	G	E	I	Q	E	I	D	K	Y	K	I	P	S	I	I	S	D	R	P	K	I	K	L	T	F	I	G	H	G	K	D	E	F	N	T	D	I	F	A	G	F	D	V	D	S	L	S	T
Template Known Secondary structure										T	T	T						T	T	S	T	T									T	T	T	T							T	T				T	T	T	T	T		S												S	S			S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		49	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		V	L	A	V	F	A	E	R	R	K	.	.	.	D	S	F	G	P	Y	V	R	L	M	S	V	T	L
Query Conservation												.	.	.
Alig confidence												.	.	.
Template Conservation
Template Sequence		E	I	E	A	A	I	D	L	A	K	E	D	I	S	P	K	S	I	E	I	N	L	L	G	C	N	M
Template Known Secondary structure											T	T	T				S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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