Job Description P64521 Confidence 4.68% Date Thu Jan 5 12:09:08 GMT 2012 Rank 22 Aligned Residues 47 % Identity 15% Template c3ho6B_ PDB info PDB header:toxin Chain: B: PDB Molecule:toxin a; PDBTitle: structure-function analysis of inositol hexakisphosphate-2 induced autoprocessing in clostridium difficile toxin a Resolution 1.60 Å

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		9	10	.	.	.	.	.	.	.	.	.													20	.	.	.	.	.	.																					.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.
Query Sequence		A	M	R	I	H	Q	Q	H	P	T	S	.	.	.	.	.	.	.	.	.	.	.	.	R	L	F	P	F	C	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	Y	R	W	.	.	.	.	H	G	S	A	E	A	Y	T	G	R	E	V	Q	D	I	P	G	V	L	A	V
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.			.
Template Conservation																																																															.
Template Sequence		T	C	N	L	F	S	K	N	P	K	N	S	I	I	I	Q	R	N	M	N	E	S	A	K	S	Y	F	L	S	D	D	G	E	S	I	L	E	L	N	K	Y	R	I	P	E	R	L	K	N	K	E	K	V	K	V	T	F	I	G	H	N	.	T	S	E	F	A	R	L	S	V	D	S	L	S	N	E	I	S	S
Template Known Secondary structure									S	G	G	G						G	G	G	G	G	G								T	T	S	S							T	T				G	G	G	T	T		S											.		S			T	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		53	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	D	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions