 |
Job Description | P0A6T3 | Confidence | 97.71% | Date | Thu Jan 5 11:03:52 GMT 2012 |
Rank | 42 | Aligned Residues | 105 |
% Identity | 18% | Template | d1ueka2 |
SCOP info | Ferredoxin-like
| GHMP Kinase, C-terminal domain
| 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE
|
Resolution | 1.70 |
|
 |
  |   |
203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | G | V | A | V | V | I | I | N | S | N | F | K | R | T | L | V | G | S | E | Y | N | T | R | R | E | Q | C | E | T | G | A | R | F | F | Q | Q | P | A | L | R | D | V | T | I | E | E | F | N | A | V | A | H | E | L | D | P | I | V | A | K | R | V | R | H | I | L | T | E | N | A | R | T | V | E | A | A | S | A | L |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|
|
|   |
|   |   |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
Template Sequence |   |
P | P | V | P | A | V | V | F | F | P | G | L | R | V | P | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | L | V | Y | R | A | V | R | P | E | D | F | G | P | D | L | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | E | A | I | L | E | A | L |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | T |
|
| G | G | G |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 190 |
  |
  |   |
283 | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | |
. | . | . | . | 350 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
| . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Q | G | D | L | K | R | M | G | E | L | M | A | E | S | H | A | S | M | R | D | D | F | E | I | T | V | P | Q | I | D | T | L | V | E | I | V | K | A | V | I | G | D | K | G | G | V | R | M | T | G | G | G | F | G | G | C | I | V | A | L | I | P | . |
E | E | L | V | P | A | V | Q | Q | A | V | A |
Query Conservation |   |
  |   |   |
|   |   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |
| . | . | . |
|   |   |   |   |   |   |   | . | . | . | . |
|   |
|   |   |   |   |   |   |
|   |   |   | . | . |
|
|   |   |   |   |
|
|
|
|
| . | . |
|
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
Template Sequence |   |
A | R | G | E | E | P | P | Y | W | N | S | L | . |
. |
. |
E | G | P | A | F | R | L | F | . |
. |
. |
. |
P | E | L | K | E | V | R | G | R | M | R | A | L | . |
. |
G | L | R | G | V | L | M | S | G | S | G | . |
. |
S | A | F | F | G | L | A | E | G | P | D | H | A | R | R | A | A | E | A | L | R |
Template Known Secondary structure |   |
 |  | T |
|
|
| S |
|
|
| T | T | . | . | . |  |  |  |  |  |  |  |
| . | . | . | . | T |  |  |  |  |  |  |  |  |  |  |  | T | . | . | T |
|  |  |  |  |  |
| T | T | S | . | . | S |
|  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |  |  |
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
191 | . | . | . | . | . | . | . | . | 200 | . | . | |
|
|
. | . | . | . | . | . | . | 210 | |
|
|
|
. | . | . | . | . | . | . | . | . | 220 | . | . | . | |
|
. | . | . | . | . | . | 230 | . | . | . | . | |
|
. | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|