|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | K | E | K | T | Q | S | L | F | A | N | A | F | G | Y | P | A | T | H | . |
T | I | Q | A | P | G | R | V | N | L | I | G | E | H | T | D | Y | N | D | G | F | V | L | P | C | A | I | D | Y | Q | T | V | I | S | C | A | P | R | D | D | R | K | V | R | V | M | A | A | D | Y | E | N | Q | L | D | E | F | S | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   | . |   |   |   |
|
|
|
|
|   |
|   |
|
|
|   |
|   |   |
|   |   |
|
|   |   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|
|
|
|   |
|   |
|
|
|   |
|   |   |
|
|   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | V | L | S | A | L | T | E | K | F | A | E | V | F | G | D | T | K | E | V | E | Y | F | F | S | P | G | R | I | N | L | I | G | E | H | T | D | Y | N | G | G | Y | V | F | P | A | S | I | T | I | G | T | T | G | L | A | R | L | R | E | D | K | K | V | K | L | Y | S | E | N | F | P | K | L | G | V | I | E | F | D |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
| T | T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  | T | T |
| G | G | G |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | P | I | V | A | H | E | N | Y | Q | W | A | N | Y | V | R | G | V | V | K | H | L | Q | L | R | N | N | S | F | . |
G | G | V | D | M | V | I | S | G | N | V | P | Q | G | A | G | L | S | S | S | A | S | L | E | V | A | V | G | T | V | L | Q | Q | L | Y | H | L | P | L | D | G | A | Q | I | A | L | N | G | Q |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |
|   |   |
|   |
|   |
|   |
|
|   |   |   |
|
|
|
|
|
|
|   |   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|   |
Template Sequence |   |
L | D | E | V | E | K | K | D | G | E | L | W | S | N | Y | V | K | G | M | I | V | M | L | K | G | A | G | Y | E | I | D | K | G | F | E | L | L | I | K | G | E | I | P | T | A | S | G | L | S | S | S | A | S | L | E | L | L | V | G | V | V | L | D | D | L | F | N | L | N | V | P | R | L | E | L | V | Q | L | G | Q |
Template Known Secondary structure |   |
T | T |
| T | T | S |
|
| T | T |
| T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
| S |
|  |  |  |  |  |  |  |
| S |
| T | T | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
  |
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | E | N | Q | F | V | G | C | N | C | G | I | M | D | Q | L | I | S | A | L | G | K | K | D | H | A | L | L | I | D | C | R | S | L | G | T | K | A | V | S | M | P | K |
Query Conservation |   |
  |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
Template Sequence |   |
K | T | E | N | D | Y | I | G | V | N | S | G | I | L | D | Q | F | A | I | G | F | G | E | V | K | K | A | I | E | L | D | C | N | T | L | K | Y | E | M | V | P | V | E | L |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
|
|
|
|
| S |  |  |  |  |  |  |  |  |
| B | T | T |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . |
  |