 |
Job Description | P0A6T3 | Confidence | 9.84% | Date | Thu Jan 5 11:03:52 GMT 2012 |
Rank | 87 | Aligned Residues | 28 |
% Identity | 18% | Template | d1c6vx_ |
SCOP info | SH3-like barrel
| DNA-binding domain of retroviral integrase
| DNA-binding domain of retroviral integrase
|
Resolution | 3.00 |
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | A | N | A | F | G | Y | P | A | T | H | T | I | Q | A | P | G | R | V | N | L | I | G | E | H | T | D | Y |
Query Conservation |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |
|
|   |   |
|
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
F | R | V | Y | Y | R | E | G | R | D | Q | L | W | K | G | P | G | E | L | L | W | K | G | E | G | A | V | L |
Template Known Secondary structure |   |
 |  |  |
|
|
|
| S | S |
| S |
|
|
|
|
|  |  |  |
|
|
| S | S | S | S |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
223 | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|