Job Description P0A6T3 Confidence 99.93% Date Thu Jan 5 11:03:52 GMT 2012 Rank 30 Aligned Residues 283 % Identity 16% Template c3ltoB_ PDB info PDB header:lyase Chain: B: PDB Molecule:mevalonate diphosphate decarboxylase; PDBTitle: crystal structure of a mevalonate diphosphate decarboxylase2 from legionella pneumophila Resolution 2.27 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure														.	.	.												.	.	.							.
Query SS confidence														.	.	.												.	.	.							.
Query Sequence		H	T	I	Q	A	P	G	R	V	N	L	I	.	.	.	G	E	H	T	D	Y	N	D	G	F	V	.	.	.	L	P	C	A	I	D	.	Y	Q	T	V	I	S	C	A	P	R	D	D	R	K	V	R	V	M	A	A	D	Y	E	N	Q	L	D	E	F	S	L	D	A	P	I	V	A	H	E	N	Y	Q	W	A
Query Conservation														.	.	.												.	.	.							.
Alig confidence														.	.	.												.	.	.							.														.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.
Template Sequence		W	F	A	Q	A	P	A	N	I	A	L	I	K	Y	X	G	K	K	D	E	N	S	N	L	P	D	N	S	S	L	S	Y	T	L	S	N	L	L	S	S	V	K	L	E	K	L	P	T	K	.	.	.	.	.	.	.	.	.	K	D	I	W	E	P	L	T	I	P	G	A	P	E	F	N	L	S	V	E	A	Q
Template Known Secondary structure																T	T		B		T	T	T			B	S	S																				S	S	S	.	.	.	.	.	.	.	.	.	S						B		T	T	S		B						S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.										60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		N	Y	V	R	G	V	V	K	H	L	Q	L	R	N	N	S	F	G	G	V	D	M	V	I	S	G	N	V	P	Q	G	A	G	L	S	S	S	A	S	L	E	V	A	V	G	T	V	L	Q	Q	L	Y	.	.	.	.	.	H	L	P	L	D	G	A	Q	I	A	L	N	G	Q	E	A	E	N	Q	F	V	G	C
Query Conservation																																																						.	.	.	.	.
Alig confidence																																																						.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		K	R	F	I	D	H	L	V	R	L	K	E	Y	F	G	Y	V	G	G	F	L	I	Q	S	S	N	N	F	P	H	S	S	G	L	A	S	S	A	S	S	F	A	A	L	T	K	C	A	S	I	A	L	S	E	L	T	Q	K	P	L	P	S	I	D	E	Q	A	Q	L	S	R	L	G	.	.	.	.	.	.	.
Template Known Secondary structure															T	T												S	S			S	S	S																								T																	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	C	G	I	M	D	Q	L	I	S	A	L	G	K	K	D	H	A	L	L	I	D	C	R	S	L	G	T	K	A	V	S	M	P	K	G	V	A	V	V	I	I	N	S	N	F	K	R	T	L	V	G	S	E	Y	N	T	R	R	E	Q	C	E	T	G	A	R	F	F	Q	Q	P	A	L	R	D	V	T	I	E
Query Conservation
Alig confidence		.	.	.												.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.												.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	S	G	S	S	C	R	S	F	Y	A	P	.	.	.	W	A	L	W	T	G	D	K	V	S	A	I	D	L	P	Y	K	D	L	L	H	Q	V	I	V	I	S	S	Q	E	K	E	I	P	S	.	.	.	.	.	.	.	.	.	.	R	V	A	H	K	L	V	K	T	S	P	F	Y	E	T	R	S	E
Template Known Secondary structure		.	.	.		G	G	G	G	G	G	G	S		S	.	.	.						T	T								S			S												T	T					.	.	.	.	.	.	.	.	.	.							G	G	G	S	T	T	T	T	T
Template Predicted Secondary structure		.	.	.												.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
					155	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200											.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.												.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	F	N	A	V	A	H	E	L	D	P	I	V	A	K	R	V	R	H	I	L	T	E	N	A	R	T	V	E	A	A	S	A	L	E	Q	G	D	L	K	R	M	G	E	L	M	A	E	S	H	A	S	M	R	D	D	F	E	I	T	V	P	Q	.	.	.	.	.	.	.	.	.	.	.	I	D	T	L	V	E
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	L	K	L	L	L	N	A	F	E	N	K	D	W	T	S	I	Y	Q	I	C	W	H	E	F	L	D	X	H	Q	L	F	K	T	C	E	K	P	F	S	Y	I	T	D	N	T	L	H	I	L	S	V	I	E	K
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T																						T	S	S	S				S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		219	220	.																						.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	K	A	V	I	G	D	K	G	G	V	R	M	T	G	G	G	F	G	G	C	I	V	A	L	I	P	E	E	L	V	P	A	V	Q	Q	A	V	A	E	Q	Y
Query Conservation
Alig confidence							.	.												.	.
Template Conservation							.	.												.	.
Template Sequence		F	W	N	E	K	.	.	G	D	G	P	V	V	T	X	D	A	G	.	.	P	N	V	H	L	L	Y	R	S	D	Q	T	D	L	A	R	Q	F	K	S	D	H	L
Template Known Secondary structure							.	.	S									S	S	.	.	S								G	G	G												T
Template Predicted Secondary structure							.	.												.	.
Template SS confidence
		278	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions