Job Description P0A6T3 Confidence 100.00% Date Thu Jan 5 11:03:52 GMT 2012 Rank 14 Aligned Residues 277 % Identity 17% Template c3k85B_ PDB info PDB header:transferase Chain: B: PDB Molecule:d-glycero-d-manno-heptose 1-phosphate kinase; PDBTitle: crystal structure of a d-glycero-d-manno-heptose 1-phosphate2 kinase from bacteriodes thetaiotaomicron Resolution 2.28 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.							40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.
Query Sequence		H	T	I	Q	A	P	G	R	V	N	L	I	G	E	H	T	D	Y	N	.	.	.	.	.	.	D	G	F	V	L	P	C	A	I	D	Y	Q	T	V	I	S	C	A	P	R	D	D	R	K	V	R	V	M	A	A	D	Y	E	N	Q	L	D	E	F	S	L	D	A	P	I	V	A	H	E	N	Y	Q	W	A	N
Query Conservation																					.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.																																																				.	.	.
Template Conservation																																																																														.	.	.
Template Sequence		V	R	S	K	A	P	L	R	L	G	L	A	G	G	G	S	D	V	S	P	Y	S	D	I	Y	G	G	L	I	L	N	A	T	I	N	L	Y	A	Y	C	T	I	E	E	T	N	S	G	R	I	E	I	N	A	Y	D	A	Q	C	C	K	S	Y	L	S	X	S	Q	L	E	I	D	G	E	A	S	.	.	.	L
Template Known Secondary structure															T	T	T	T	S	T	T																										S	S	S							G	G	G	T									S	S					S	S	S		.	.	.
Template Predicted Secondary structure																																																																														.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.				.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	R	G	V	V	K	H	L	Q	L	R	N	N	S	F	G	G	V	D	M	V	I	S	G	N	V	P	Q	G	A	G	L	S	S	S	A	S	L	E	V	A	V	G	T	V	L	Q	Q	L	Y	H	L	P	L	D	G	A	Q	I	A	L	N	G	Q	E	A	E	N	Q	F	V	G	C	N	C	G	I	M	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	G	V	Y	N	R	I	I	R	D	Y	R	L	E	P	K	S	F	K	I	T	T	Y	N	D	A	P	A	G	S	G	L	G	T	S	S	T	X	V	V	C	I	L	K	A	F	I	E	W	L	S	L	P	L	G	D	Y	E	T	S	R	L	A	Y	E	I	E	R	K	D	L	G	L	S	G	G	K	Q	D
Template Known Secondary structure														T													S	S		S	S	T	T	S																			T																		T	T	T						S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	I	S	A	L	G	K	K	D	H	A	L	L	I	D	C	R	S	L	G	T	K	A	V	S	M	P	K	G	V	A	V	V	I	I	N	S	N	F	K	R	T	L	V	G	S	E	Y	N	T	R	R	E	Q	C	E	T	G	A	R	F	F	Q	Q	P	A	L	R	D	V	T	I	E	E	F	N	A	V	A
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	Y	A	A	A	F	G	G	F	N	Y	X	E	F	L	Q	N	D	L	V	I	V	N	P	L	K	X	K	R	W	I	V	D	E	L	E	S	S	X	V	L	Y	F	T	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S								T	T	T																				T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	L	D	P	I	V	A	K	R	V	R	H	I	L	T	E	N	A	R	T	V	E	A	A	S	A	L	E	Q	G	D	L	K	R	M	G	E	L	M	A	E	S	H	A	S	M	R	D	D	F	E	I	T	V	P	Q	I	D	T	L	V	E	I	V	K	A	V	I	G	D	K	G	G	V	R	M	T	G	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		.	.	.	.	.	.	.	.	.	A	I	E	A	X	H	K	I	K	Q	S	A	I	D	T	K	L	A	L	L	K	G	D	V	G	E	F	A	R	I	L	G	E	G	W	E	.	.	.	.	.	.	.	.	.	.	N	K	K	K	E	A	F	D	V	A	T	G	A	.	.	G	A	X	A	G	K	V	S	G	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.																					T	T															.	.	.	.	.	.	.	.	.	.		T	T				S						T	.	.			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
											227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.											.	.	.	.	.	.	.	270	.	.	.	.	.			.	.	.	.	280	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	G	G	C	I	V	A	L	I	P	E	E	L	V	P	A	V	Q	Q	A	V	A	E
Query Conservation
Alig confidence			.	.	.
Template Conservation			.	.	.
Template Sequence		G	.	.	.	F	I	X	F	V	V	E	P	T	R	K	E	E	V	V	R	A	L	N	N
Template Known Secondary structure			.	.	.
Template Predicted Secondary structure			.	.	.
Template SS confidence
		300				.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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