Job Description P0A6T3 Confidence 100.00% Date Thu Jan 5 11:03:52 GMT 2012 Rank 7 Aligned Residues 323 % Identity 12% Template c3k17A_ PDB info PDB header:transferase Chain: A: PDB Molecule:lin0012 protein; PDBTitle: crystal structure of a lin0012 protein from listeria innocua Resolution 2.10 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		H	T	I	Q	A	P	G	R	V	N	L	I	G	E	H	T	D	Y	.	N	D	G	F	V	L	P	C	A	I	D	Y	Q	T	V	I	S	C	A	P	R	D	D	R	K	V	R	V	M	A	A	D	Y	E	N	Q	L	D	E	F	S	L	D	A	P	I	V	A	H	E	N	Y	Q	W	A	N	Y	V	R	G	V
Query Conservation																				.
Alig confidence																				.																																			.
Template Conservation																																																							.
Template Sequence		L	Q	V	K	I	P	G	K	L	Y	V	A	G	E	Y	A	V	V	E	S	G	H	T	A	I	L	T	A	V	N	R	Y	I	T	L	T	L	E	D	S	E	R	N	E	L	W	I	P	H	Y	E	N	P	.	V	S	W	P	I	G	G	E	L	K	P	D	G	E	H	W	T	F	T	A	E	A	I	N	I	A
Template Known Secondary structure															T	T	G	G	G	S	T	T																				S	S						T	T		S	S		.	B				T	T	S					S		G	G	G
Template Predicted Secondary structure																																																							.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		V	K	H	L	Q	L	R	N	N	S	F	G	.	.	.	.	G	V	D	M	V	I	S	G	N	V	P	Q	G	A	G	L	S	S	S	A	S	L	E	V	A	V	G	T	V	L	Q	Q	L	Y	H	L	P	L	D	G	A	Q	I	A	L	N	G	Q	E	A	E	N	Q	F	V	G	C	N	C	G	I	M	D	Q
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.																																																													.
Template Conservation																																																																														.
Template Sequence		T	T	F	L	K	S	E	G	I	E	L	T	P	V	K	X	V	I	E	T	E	L	I	D	Q	S	G	A	K	Y	G	L	G	S	S	A	A	A	T	V	A	V	I	N	A	L	X	T	K	F	Y	P	E	I	S	X	L	K	K	F	K	L	A	A	L	S	H	L	V	V	Q	G	N	G	S	C	.	G	D	I
Template Known Secondary structure								T	T													S	S	B		T	T	S		B		S	S																				T	T	S																		S	S			S	.
Template Predicted Secondary structure																																																																														.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190																				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	S	A	L	G	K	K	D	H	A	L	L	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	R	S	L	G	T	K	A	V	S	M	P	K	G	V	A	V	V	I	I	N	S	N	F	K	R	T	L	V	G	S	E	Y	N	T	R	R	E	Q	C	E	T	G	A	R	F
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	C	X	Y	G	G	W	I	A	Y	T	T	F	D	Q	E	W	V	K	H	R	L	A	Y	K	S	L	E	W	F	X	K	E	P	W	P	X	L	Q	I	E	T	L	E	E	P	V	P	T	F	S	V	G	W	T	G	T	P	V	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S																	T	T	S								S			T	T										S	S								S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.						.	.	.	.	.	310	.
Predicted Secondary structure																																																																						.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.
Query Sequence		F	Q	Q	P	A	L	R	D	V	T	I	E	E	F	N	A	V	A	H	E	L	D	P	I	V	A	K	R	V	R	H	I	L	T	E	N	A	R	T	V	E	A	A	S	A	L	E	Q	G	D	L	K	R	M	G	E	L	M	A	E	S	H	A	S	M	R	D	D	.	.	.	.	.	F	E	I	T	V	P	Q
Query Conservation																																																																						.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	G	K	L	V	S	Q	I	H	A	F	K	Q	E	D	S	K	N	Y	Q	H	F	L	T	R	N	N	E	I	X	K	Q	I	I	Q	A	F	H	T	K	D	E	E	L	L	Y	S	S	I	K	E	N	R	R	I	L	Q	E	L	G	T	K	A	G	V	N	I	E	T	S	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.																																							T																								T				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		I	D	T	L	V	E	I	V	K	A	V	I	G	D	K	G	G	V	R	M	T	G	G	G	F	G	G	C	I	V	A	L	I	.	P	E	E	L	V	P	A	V	Q	Q	A	V	A	E	Q	Y	E	A	K	T	G	I	K	E	T	F	Y	V	C	K	P	S	Q	G
Query Conservation																																			.
Alig confidence													.	.			.																		.																				.	.
Template Conservation													.	.			.																																						.	.
Template Sequence		L	K	E	L	A	D	S	A	E	N	X	.	.	G	G	.	A	G	K	S	S	G	S	G	G	G	D	C	G	I	A	F	S	K	T	K	E	L	A	E	K	L	V	N	E	W	E	K	L	G	I	K	H	.	.	L	P	F	H	T	G	R	V	Q	I	T	E	G
Template Known Secondary structure												T	.	.	T	S	.						T	T		S	S	S							S	S														T	T				.	.					B
Template Predicted Secondary structure													.	.			.																																						.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.			310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.			.	350	.	.	.	.	.	.	.	.	.	360	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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