Job Description P0A6T3 Confidence 100.00% Date Thu Jan 5 11:03:52 GMT 2012 Rank 20 Aligned Residues 270 % Identity 16% Template c3hulA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homoserine kinase; PDBTitle: structure of putative homoserine kinase thrb from listeria2 monocytogenes Resolution 2.19 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	T	I	Q	A	P	G	R	V	N	L	I	G	E	H	T	D	Y	N	D	G	F	V	L	P	C	A	I	D	Y	Q	T	V	I	S	C	A	P	R	D	D	R	K	V	R	V	M	A	A	D	Y	E	N	Q	L	D	E	F	S	L	D	A	P	I	V	A	H	E	N	Y	Q	W	A	N	Y	V	R	G	V
Query Conservation
Alig confidence																.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	R	I	R	V	P	A	T	T	A	N	L	G	.	.	.	.	.	P	G	F	D	S	C	G	L	A	L	T	L	Y	L	T	L	D	I	G	A	E	A	D	S	W	Y	I	E	H	N	I	G	G	G	I	P	H	D	E	T	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I
Template Known Secondary structure													S		T	.	.	.	.	.	T		T	T	T																		S	S									T	T			S	S	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.						.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																			.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	H	L	Q	L	R	N	N	S	F	G	G	V	D	M	V	I	S	G	N	V	P	Q	G	A	G	L	S	S	S	A	S	L	E	V	A	V	G	T	V	L	Q	Q	L	Y	H	L	P	L	D	G	A	Q	I	A	L	N	G	Q	E	A	E	N	Q	F	V	G	C	N	C	G	I	M	D	Q	L	I	S	A
Query Conservation
Alig confidence																																																																	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.
Template Sequence		I	E	T	A	L	N	L	A	P	N	L	T	P	H	H	L	V	M	T	C	D	I	P	P	A	R	G	L	G	S	S	S	A	A	V	V	A	G	I	E	L	A	N	T	L	A	E	L	N	L	S	K	E	E	K	V	R	I	A	A	E	I	E	.	.	.	.	.	.	.	G	H	P	D	N	V	A	P	A	V
Template Known Secondary structure										T	T												S		T	T	S	S	S	S																	T	T																	.	.	.	.	.	.	.	S		S	T	T
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	K	K	D	H	A	L	L	I	D	C	R	S	L	G	T	K	A	V	S	M	P	K	G	V	A	V	V	I	I	N	S	N	F	K	R	T	L	V	G	S	E	Y	N	T	R	R	E	Q	C	E	T	G	A	R	F	F	Q	Q	P	A	L	R	D	V	T	I	E	E	F	N	A	V	A	H	E	L	D	P
Query Conservation
Alig confidence					.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	N	.	.	.	W	V	V	G	A	K	L	D	G	E	D	F	Y	V	R	H	L	F	P	C	A	L	I	A	F	I	P	K	A	E	L	L	P	D	T	L	P	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	.	.	.								T	T																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	A	K	R	V	R	H	I	L	T	E	N	A	R	T	V	E	A	A	S	A	L	E	Q	G	D	L	K	R	M	G	E	L	M	A	E	S	H	A	S	M	R	D	D	F	E	I	T	V	P	Q	I	D	T	L	V	E	I	V	K	A	V	I	G	D	K	G	G	V	R	M	T	G	G	G	F	G	G	C
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																	.	.	.	.	.	.																			.	.												.	.
Template Conservation		.	.	.	.	.	.	.																																	.	.	.	.	.	.																			.	.												.	.
Template Sequence		.	.	.	.	.	.	.	E	A	V	Q	A	S	S	I	A	N	V	M	I	A	A	I	L	R	N	D	M	T	L	A	G	E	M	M	E	R	D	L	.	.	.	.	.	.	W	S	Q	L	V	P	H	L	A	Q	I	R	D	V	A	K	N	Q	.	.	G	A	Y	A	A	C	L	S	G	A	G	.	.	P	T
Template Known Secondary structure		.	.	.	.	.	.	.																	T	T	T										T				.	.	.	.	.	.			T	T	G	G	G										T	T	.	.	T								T	T	S	.	.	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																																	.	.	.	.	.	.																			.	.												.	.
Template SS confidence
									181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.							.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.			.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.		.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		I	V	A	L	I	P	E	E	L	V	P	A	V	Q	Q	A	V	A	E	Q	Y	E	A	K	T	G	I	K	E	T	F	Y	V	C	K	P	S	.	Q	G	A
Query Conservation																																							.
Alig confidence																			.	.	.	.	.																.
Template Conservation																			.	.	.	.	.
Template Sequence		V	L	V	F	A	P	R	N	L	A	N	K	L	Q	T	S	L	.	.	.	.	.	Q	T	L	E	I	D	A	D	V	L	L	L	D	V	E	G	S	G	A
Template Known Secondary structure								G	G	G									.	.	.	.	.		T	T			S	S							B
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.						.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions