Job Description P0A6T3 Confidence 99.08% Date Thu Jan 5 11:03:52 GMT 2012 Rank 40 Aligned Residues 287 % Identity 18% Template c3f0nB_ PDB info PDB header:lyase Chain: B: PDB Molecule:mevalonate pyrophosphate decarboxylase; PDBTitle: mus musculus mevalonate pyrophosphate decarboxylase Resolution 1.90 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		H	T	I	Q	A	P	G	R	V	N	L	I	G	E	H	T	D	Y	N	D	G	.	.	F	V	L	P	C	A	I	D	Y	Q	T	V	I	S	C	A	P	R	D	D	R	K	V	R	V	M	A	A	D	Y	E	N	Q	L	D	E	F	S	L	D	A	P	I	V	A	H	E	N	Y	Q	W	A	N	Y	V	R	G
Query Conservation																							.	.
Alig confidence															.	.	.	.					.	.
Template Conservation															.	.	.	.
Template Sequence		V	T	C	T	A	P	V	N	I	A	V	I	K	.	.	.	.	Y	W	G	K	R	D	E	A	L	I	L	P	I	N	S	S	L	S	V	T	L	H	Q	D	Q	L	K	T	T	T	T	V	A	I	S	K	D	F	T	E	D	R	I	W	L	N	G	R	E	E	D	V	G	Q	P	R	L	Q	A	C	L	R	E
Template Known Secondary structure															.	.	.	.							T	T	T	T			S	S							B		T	T	T	S										S	S			S						T	T					T	T
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		99	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		V	V	K	H	L	Q	L	R	N	.	N	S	F	G	G	V	D	M	V	I	S	G	N	V	P	Q	G	A	G	L	S	S	S	A	S	L	E	V	A	V	G	T	V	L	Q	Q	L	Y	H	L	P	L	D	G	A	Q	I	A	L	N	G	Q	E	A	E	N	Q	F	V	G	C	N	C	G	I	M	D	Q	L	I
Query Conservation											.
Alig confidence											.																	.	.	.	.	.																															.	.	.	.	.	.	.						.		.	.	.	.	.
Template Conservation																												.	.	.	.	.																															.	.	.	.	.	.	.						.		.	.	.	.	.
Template Sequence		I	R	R	L	A	R	K	R	R	L	S	L	S	Y	K	V	H	V	A	S	V	N	N	F	P	A	.	.	.	.	.	S	S	A	A	G	Y	A	C	L	A	Y	T	L	A	Q	V	Y	G	V	E	G	D	L	S	E	V	A	R	R	G	.	.	.	.	.	.	.	S	G	S	A	C	.	R	.	.	.	.	.
Template Known Secondary structure												G	G	G														.	.	.	.	.																		T			S										.	.	.	.	.	.	.		G	G	G	G	.	G	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.																															.	.	.	.	.	.	.						.		.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.								.	.	.	.	.		.
		178	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure														.	.	.																		.	.	.	.
Query SS confidence														.	.	.																		.	.	.	.
Query Sequence		S	A	L	G	K	K	D	H	A	L	L	I	.	.	.	D	C	R	S	L	G	T	K	A	V	S	M	P	K	G	V	A	.	.	.	.	V	V	I	I	N	S	N	F	K	R	T	L	V	G	S	E	Y	N	T	R	R	E	Q	C	E	T	G	A	R	F	F	Q	Q	P	A	L	R	D	V	T	I	E	E	F
Query Conservation														.	.	.																		.	.	.	.
Alig confidence														.	.	.																		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	Y	G	G	F	V	E	W	Q	M	G	E	Q	A	D	G	K	D	S	I	A	R	Q	I	A	P	E	W	H	W	P	Q	L	R	I	L	I	L	V	V	S	A	D	K	K	Q	T	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Known Secondary structure		G	G	S	S	S								S		T	T		T	T									T	T	S		T	T															S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.																														.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310											.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	V	A	H	E	L	D	P	I	V	A	K	R	V	R	H	I	L	T	E	N	A	R	T	V	E	A	A	S	A	L	E	Q	G	D	L	K	R	M	G	E	L	M	A	E	S	H	A	S	M	R	D	D	F	E	I	T	V	P	.	.	.	.	.	.	.	.	.	.	Q	I	D	T	L	V	E	I	V	K
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	M	Q	T	S	V	E	T	S	T	L	L	K	F	R	A	E	S	V	V	P	E	R	M	K	E	M	T	R	C	I	Q	E	Q	D	F	Q	G	F	A	Q	L	T	M	K	D	S	N	Q	F	H	A	T	C	L	D	T	F	P	P	I	S	Y	L	N	D	T	S	R	R	I	I	Q	L	V	H	R	F	N
Template Known Secondary structure																					T														T	T																						T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	I	G	D	K	G	G	V	R	M	T	G	G	G	F	G	G	C	I	V	A	L	I	P	E	E	L	V	P	A	V	Q	Q	A	V	A	E	Q	Y
Query Conservation
Alig confidence																	.	.
Template Conservation																	.	.
Template Sequence		T	H	H	G	Q	T	K	V	A	Y	T	F	D	A	G	.	.	P	N	A	V	I	F	T	L	E	D	T	V	A	E	F	V	A	A	V	R	H	S	F
Template Known Secondary structure					T	S									S	S	.	.	S								G	G	G												S
Template Predicted Secondary structure																	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions