Job Description P0A6T3 Confidence 100.00% Date Thu Jan 5 11:03:52 GMT 2012 Rank 6 Aligned Residues 327 % Identity 20% Template c2r42A_ PDB info PDB header:transferase Chain: A: PDB Molecule:mevalonate kinase; PDBTitle: the biochemical and structural basis for feedback2 inhibition of mevalonate kinase and isoprenoid metabolism Resolution 2.40 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																														.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.
Query Sequence		P	A	T	H	T	I	Q	A	P	G	R	V	N	L	I	G	E	H	T	D	Y	N	D	G	F	V	L	P	C	A	I	D	Y	Q	T	V	I	S	C	A	P	R	D	D	R	K	V	R	V	M	A	A	D	Y	E	N	Q	L	D	E	.	.	.	.	.	F	S	L	D	A	P	I	V	A	H	E	N	Y	Q	W
Query Conservation																																																														.	.	.	.	.
Alig confidence																																																														.	.	.	.	.
Template Conservation
Template Sequence		S	E	V	L	L	V	S	A	P	G	K	V	I	L	H	G	E	H	A	V	V	H	G	K	V	A	L	A	V	A	L	N	L	R	T	F	L	V	L	R	P	Q	S	N	G	K	V	S	L	N	L	P	N	V	G	I	K	Q	V	W	D	V	A	T	L	Q	L	L	D	T	G	F	Q	L	E	K	L	K	K	V
Template Known Secondary structure			S															T	T	T	T	T	T	T																				S	S	S						B	T	T	T	T	B											T									T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		93	.	.															.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.
Query Sequence		A	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	G	V	V	K	H	L	Q	L	R	N	N	S	F	G	G	V	D	M	V	I	S	G	N	V	P	Q	G	A	G	L	S	S	S	A	S	L	E	V	A	V	G	T	V	L	Q	Q	L	Y	H	L	P	L	D	G	A	Q	.	.	.	.	.
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.
Template Conservation
Template Sequence		A	G	L	P	R	D	C	V	G	N	E	G	L	S	L	L	A	F	L	Y	L	Y	L	A	I	C	R	K	Q	R	T	L	P	S	L	D	I	M	V	W	S	E	L	P	P	G	A	G	L	G	S	S	A	A	Y	S	V	C	V	A	A	A	L	L	T	A	C	E	E	V	T	N	P	L	K	D	R	G	S	I
Template Known Secondary structure				T	T	S				S	T	T																T	T	S	S	S											S	S		T	T	S	S	S																		T	T	S	S			T	T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
												154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	I	A	L	N	G	Q	E	A	E	N	Q	F	V	G	C	N	C	G	I	M	D	Q	L	I	S	A	L	G	K	K	D	H	A	L	L	I	D	C	R	S	L	G	T	K	A	V	S	M	P	K	G	V	A	V	V	I	I	N	S	N	F	K	R	T	L	V	G	S	E	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																			.											.	.	.	.	.
Template Conservation																														.											.	.	.	.	.
Template Sequence		G	S	W	P	E	E	D	L	K	S	I	N	K	W	A	Y	E	G	E	R	V	I	H	G	N	P	S	G	.	V	D	N	S	V	S	T	W	G	G	.	.	.	.	.	A	L	R	Y	Q	Q	G	K	M	S	S	L	K	R	L	P	A	L	Q	I	L	L	T	N	T	K	V	P	R	S	T	K	A	L	V	A
Template Known Secondary structure																									S	S			S	.										S	.	.	.	.	.					S	S	S						S
Template Predicted Secondary structure																														.											.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.						.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		N	T	R	R	E	Q	C	E	T	G	A	R	F	F	Q	Q	P	A	L	R	D	V	T	I	E	E	F	N	A	V	A	H	E	L	D	P	I	V	A	K	R	V	R	H	I	L	T	E	N	A	R	.	T	V	E	A	A	S	A	L	E	Q	G	D	L	K	R	M	G	E	L	M	A	E	S	H	A	S	M	R
Query Conservation																																																					.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	I	K	F	P	E	I	M	A	P	L	L	T	S	I	D	A	I	S	L	E	C	E	R	V	L	G	E	M	A	A	A	P	V	P	E	Q	Y	L	V	L	E	E	L	M	D	M	N	Q	H	H	L	N
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S																										T	T				T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		249	250	.	.																							.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.		.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		D	D	F	E	I	T	V	P	Q	I	D	T	L	V	E	I	V	K	A	V	I	G	D	K	G	G	V	R	M	T	G	G	G	F	G	G	C	I	V	A	L	I	P	E	E	L	V	P	A	V	Q	Q	A	V	A	E	Q	Y	E	A	K	T	G	I	K	E	T	F	Y	V	C	K	P	S	.	Q	G	A
Query Conservation																																																																												.
Alig confidence				.																			.	.	.																																								.	.	.									.
Template Conservation				.																			.	.	.																																								.	.	.
Template Sequence		A	L	.	G	V	G	H	A	S	L	D	Q	L	C	Q	V	T	A	A	H	G	.	.	.	L	H	S	K	L	T	G	A	G	G	G	G	C	G	I	T	L	L	K	P	G	L	E	R	A	K	V	E	A	A	K	Q	A	L	T	G	C	G	F	.	.	.	D	C	W	E	T	S	I	G	A	P	G	V
Template Known Secondary structure			T	.	T																T	T	.	.	.							T	T		S	S	S								S	S			T													T	T		.	.	.								S				S
Template Predicted Secondary structure				.																			.	.	.																																								.	.	.
Template SS confidence
		307	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.				.	.	.	.	370	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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