Job Description P0A6T3 Confidence 99.69% Date Thu Jan 5 11:03:52 GMT 2012 Rank 35 Aligned Residues 285 % Identity 18% Template c2hkeB_ PDB info PDB header:lyase Chain: B: PDB Molecule:diphosphomevalonate decarboxylase, putative; PDBTitle: mevalonate diphosphate decarboxylase from trypanosoma brucei Resolution 1.80 Å

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		21	.	.	.	.	.	.	.	.	30	.									.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence													.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		H	T	I	Q	A	P	G	R	V	N	L	.	.	.	.	.	.	.	.	I	G	E	H	T	D	Y	N	D	G	F	V	L	P	C	A	I	D	.	.	.	Y	Q	T	V	I	S	C	A	P	R	D	D	R	K	V	R	V	M	A	A	D	Y	E	N	Q	L	D	E	F	S	L	D	A	P	I	V	A	H	E	N
Query Conservation													.	.	.	.	.	.	.	.																			.	.	.
Alig confidence													.	.	.	.	.	.	.	.																			.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	V	E	A	P	I	N	I	A	F	I	K	Y	W	G	K	R	E	G	G	E	T	L	I	L	P	T	N	D	S	F	S	I	T	L	S	A	S	P	F	R	S	K	T	S	V	E	L	R	D	D	.	.	.	.	.	.	.	.	.	.	.	I	E	T	D	T	L	R	L	N	G	T	E	V	D	V	G	K
Template Known Secondary structure																		B		T	T		T	T	T	T		B	S	S							B		S	S	S	S										S	S	.	.	.	.	.	.	.	.	.	.	.		S	S						T	T					G	G	G
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.												.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	W	A	N	Y	V	R	G	V	V	K	H	L	Q	L	R	N	N	S	F	G	G	V	D	M	V	I	S	G	N	V	P	Q	G	A	G	L	S	S	S	A	S	L	E	V	A	V	G	T	V	L	Q	Q	L	Y	H	L	P	L	D	G	A	Q	I	A	L	N	G	Q	E	A	E	N	Q	F	V	G	C	N
Query Conservation
Alig confidence																																																																							.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.
Template Sequence		T	P	R	V	Q	S	M	L	L	H	L	R	S	T	C	P	E	E	L	K	N	K	K	V	N	I	V	S	E	N	N	F	P	T	A	A	G	M	A	S	S	A	S	G	Y	C	A	M	S	A	A	L	I	R	A	F	K	S	T	T	N	V	S	M	L	A	R	L	G	.	.	.	.	.	.	.	S	G	S	A
Template Known Secondary structure														T	T	S		T	T	T	T	T	S												T	T	S																				T	T			S										.	.	.	.	.	.	.		G	G	G
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.								.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																						.	.	.																		.	.	.	.
Query SS confidence																						.	.	.																		.	.	.	.
Query Sequence		C	G	I	M	D	Q	L	I	S	A	L	G	K	K	D	H	A	L	L	I	.	.	.	D	C	R	S	L	G	T	K	A	V	S	M	P	K	G	V	A	.	.	.	.	V	V	I	I	N	S	N	F	K	R	T	L	V	G	S	E	Y	N	T	R	R	E	Q	C	E	T	G	A	R	F	F	Q	Q	P	A	L
Query Conservation																						.	.	.																		.	.	.	.
Alig confidence			.		.	.	.	.	.													.	.	.																		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.		.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	.	R	.	.	.	.	.	S	A	F	G	G	F	V	I	W	N	K	G	E	K	P	D	G	S	D	C	V	A	T	Q	F	V	D	E	T	H	W	P	E	I	Q	V	M	C	A	V	L	K	G	A	Q	K	D	V	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	.	G	.	.	.	.	.	T	T	S	S	S								S		T	T	S	T	T									T	T	S		T	T												S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.		.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		148		.						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.								.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.
Query Sequence		R	D	V	T	I	E	E	F	N	A	V	A	H	E	L	D	P	I	V	A	K	R	V	R	H	I	L	T	E	N	A	R	T	V	E	A	A	S	A	L	E	Q	G	D	L	K	R	M	G	E	L	M	A	E	S	H	A	S	M	R	D	.	.	.	.	.	.	.	D	F	E	I	T	V	P	Q	I	D	T	L
Query Conservation																																																															.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	T	K	G	M	Q	Q	S	L	K	T	S	P	L	M	K	K	R	I	S	E	T	V	P	E	R	M	K	I	A	S	R	A	I	K	A	R	D	F	A	T	F	A	E	I	A	M	L	E	S	D	D	L	Q	E	I	C	A	T	T	E	P	K	I	T	Y	A	T	E	D	S	Y	A	M
Template Known Secondary structure		.	.	.	.	.	.	.												T	T							T																T																						T	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		316	.	.	.	320	.	.	.	.				.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		V	E	I	V	K	A	V	I	G	.	.	.	D	K	G	G	V	R	M	T	G	G	G	F	G	G	C	I	V	A	L	I	P	E	E	L	V	P	A	V	Q	Q	A	V	A	E	Q	Y
Query Conservation											.	.	.
Alig confidence											.	.	.												.	.
Template Conservation																									.	.
Template Sequence		I	R	L	V	K	A	Y	N	A	K	K	G	R	T	A	L	A	Y	T	F	D	A	G	.	.	A	N	C	F	L	F	V	L	K	E	D	L	P	E	A	V	A	M	L	M	E	H	F
Template Known Secondary structure													T	S									S	S	.	.	S								G	G	G												S
Template Predicted Secondary structure																									.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions