 |
Job Description | P0A6T3 | Confidence | 9.13% | Date | Thu Jan 5 11:03:52 GMT 2012 |
Rank | 95 | Aligned Residues | 72 |
% Identity | 10% | Template | c2akjA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:ferredoxin--nitrite reductase, chloroplast; |
PDBTitle: structure of spinach nitrite reductase
|
Resolution | 2.80 Å |
|
 |
  |   |
307 | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | T | V | P | Q | I | D | T | L | V | E | I | V | K | A | V | I | G | D | K | G | G | V | R | M | T | G | G | G | F | G | G | C | I | V | A | L | I | P | E | E | L | V | P | A | V | Q | Q | A | V | A | E | Q | Y | E | A | K | T | G | I | K | E | T | F | Y | V | C | K | P | S | Q | G | A | G | Q | C |
Query Conservation |   |
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |   |
|
|   |
|
|   |   |   |
|   |
|   |
| . | . |
|
|
|   |   |
| . | . |
|
|   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |
|
Template Sequence |   |
L | Q | A | D | E | M | E | E | L | A | R | I | A | D | V | Y | G | S | G | E | L | . |
. |
R | L | T | V | E | Q | . |
. |
N | I | I | I | P | N | V | E | N | S | K | I | D | S | L | L | N | E | P | L | L | K | E | R | Y | S | P | E | P | P | I | L | M | K | G | L | V | A | C | T | G | S | Q | F | C |
Template Known Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |  |  | . | . |  |  |  | T | T | T | . | . |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  | T | T | S |  |  |  |  | T | T | S |
| S | S |
|
| T | T | T | T |  |  |  |  |
|
| G | G | G | T |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  | . | . |  |  |  |
|
|
| . | . |
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
376 | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | |
|
. | . | . | 400 | . | . | |
|
. | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|