Job Description P0A6T3 Confidence 100.00% Date Thu Jan 5 11:03:52 GMT 2012 Rank 4 Aligned Residues 368 % Identity 31% Template c2a2cA_ PDB info PDB header:transferase Chain: A: PDB Molecule:n-acetylgalactosamine kinase; PDBTitle: x-ray structure of human n-acetyl galactosamine kinase2 complexed with mg-adp and n-acetyl galactosamine 1-3 phosphate Resolution 1.65 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	K	T	Q	S	L	F	A	N	A	F	G	Y	P	A	T	H	T	I	Q	A	P	G	R	V	N	L	I	G	E	H	T	D	Y	N	D	G	F	V	L	P	C	A	I	D	Y	Q	T	V	I	S	C	A	P	R	D	D	R	K	V	R	V	M	A	A	D	Y	E	N	Q	L	D	E	F	S	L	D	A	P
Query Conservation
Alig confidence																																																																							.	.
Template Conservation																																																																							.	.
Template Sequence		L	L	K	L	K	E	M	F	N	S	K	F	G	S	I	P	K	F	Y	V	R	A	P	G	R	V	N	I	I	G	E	H	I	D	Y	C	G	Y	S	V	L	P	M	A	V	E	Q	D	V	L	I	A	V	E	P	V	K	T	Y	A	L	Q	L	A	N	T	N	P	L	.	.	Y	P	D	F	S	T	S	A	N
Template Known Secondary structure														S	S			S														T	T		G	G	G	T			B																	S	S	S							S	S	T	T	.	.	S
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		I	V	A	H	E	N	Y	Q	W	A	N	Y	V	R	G	V	V	K	H	L	Q	L	R	.	.	N	N	S	F	G	G	V	D	M	V	I	S	G	N	V	P	Q	G	A	G	L	S	S	S	A	S	L	E	V	A	V	G	T	V	L	Q	Q	L	Y	H	L	P	L	D	G	A	Q	I	A	L	N	G	Q	E	A
Query Conservation																									.	.
Alig confidence																									.	.
Template Conservation
Template Sequence		N	I	D	K	T	K	P	L	W	H	N	Y	F	L	C	G	L	K	G	I	Q	E	H	F	G	L	S	N	L	T	G	M	N	C	L	V	D	G	N	I	P	P	S	S	G	L	S	S	S	S	A	L	V	C	C	A	G	L	V	T	L	T	V	L	G	R	N	L	S	K	V	E	L	A	E	I	C	A	K	S
Template Known Secondary structure						S	S																		T	T			S												S		T	T	S	S	S																			T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		E	N	Q	F	V	G	C	N	C	G	I	M	D	Q	L	I	S	A	L	G	K	K	D	H	A	L	L	I	D	C	R	S	L	G	T	K	A	V	S	M	P	K	G	V	A	V	V	I	I	N	S	N	F	K	R	T	L	V	.	G	S	E	Y	N	T	R	R	E	Q	C	E	T	G	A	R	F	F	Q	Q	P
Query Conservation																																																												.
Alig confidence				.																																																								.
Template Conservation				.
Template Sequence		E	R	.	Y	I	G	T	E	G	G	G	M	D	Q	S	I	S	F	L	A	E	E	G	T	A	K	L	I	E	F	S	P	L	R	A	T	D	V	K	L	P	S	G	A	V	F	V	I	A	N	S	C	V	E	M	N	K	A	A	T	S	H	F	N	I	R	V	M	E	C	R	L	A	A	K	L	L	A	K	Y
Template Known Secondary structure			G	.	G	G	T					S										B	T	T	B						T	T	T	T									T	T														G	G	G	S	S
Template Predicted Secondary structure				.
Template SS confidence
		179	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		241	.	.	.																																													.	.	.	.	.	250	.	.	.	.	.	.	.	.	.							260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Query Sequence		A	L	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	I	E	E	F	N	A	V	A	H	E	L	D	P	.	.	.	.	.	.	I	V	A	K	R	V	R	H	I	L	T
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Conservation
Template Sequence		K	S	L	Q	W	D	K	V	L	R	L	E	E	V	Q	A	K	L	G	I	S	L	E	E	M	L	L	V	T	E	D	A	L	H	P	E	P	Y	N	P	E	E	I	C	R	C	L	G	I	S	L	E	E	L	R	T	Q	I	L	S	P	N	T	Q	D	V	L	I	F	K	L	Y	Q	R	A	K	H	V	Y	S
Template Known Secondary structure		T	T			T	T	T												T														S		S	S		B										T										T	S		G	G	G	T	T				B
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.				.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		E	N	A	R	T	V	E	A	A	S	A	L	E	.	.	.	Q	G	D	L	K	R	M	G	E	L	M	A	E	S	H	A	S	M	R	D	D	F	E	I	T	V	P	Q	I	D	T	L	V	E	I	V	K	A	V	I	G	D	K	G	G	V	R	M	T	G	G	G	F	G	G	C	I	V	A	L	I	P	E	E
Query Conservation															.	.	.
Alig confidence															.	.	.																																								.	.
Template Conservation																																																									.	.
Template Sequence		E	A	A	R	V	L	Q	F	K	K	I	C	E	E	A	P	E	N	M	V	Q	L	L	G	E	L	M	N	Q	S	H	M	S	C	R	D	M	Y	E	C	S	C	P	E	L	D	Q	L	V	D	I	C	R	K	F	.	.	G	A	Q	G	S	R	L	T	G	A	G	W	G	G	C	T	V	S	M	V	P	A	D
Template Known Secondary structure																		T	T																			T	S																	T	.	.	T		S						T	T		S	S	S								G	G
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.			.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	P	A	V	Q	Q	A	V	A	E	Q	Y	E	A	K	T	G	I	K	E	T	F	Y	V	C	K	P	S	Q	G	A	G
Query Conservation
Alig confidence																				.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		K	L	P	S	F	L	A	N	V	H	K	A	Y	Y	Q	K	Q	S	.	.	.	.	L	F	A	T	K	P	G	G	G	A	L
Template Known Secondary structure		G																	S	.	.	.	.							B
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.					.	.	.	.	.	.	440	.	.	.	.