Job Description P0A6T3 Confidence 100.00% Date Thu Jan 5 11:03:52 GMT 2012 Rank 10 Aligned Residues 307 % Identity 22% Template c1kkhA_ PDB info PDB header:transferase Chain: A: PDB Molecule:mevalonate kinase; PDBTitle: crystal structure of the methanococcus jannaschii2 mevalonate kinase Resolution 2.40 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	A	T	H	T	I	Q	A	P	G	R	V	N	L	I	G	E	H	T	D	Y	N	D	G	F	V	L	P	C	A	I	D	Y	Q	T	V	I	S	C	A	P	R	D	D	R	K	V	R	V	M	A	A	D	Y	E	N	Q	L	D	E	F	S	L	D	A	P	I	V	A	H	E	N	Y	Q	W	A	N	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	S	H	M	I	I	E	T	P	S	K	V	I	L	F	G	E	H	A	V	V	Y	G	Y	R	A	I	S	M	A	I	D	L	T	S	T	I	E	I	K	E	T	Q	E	D	E	I	I	L	N	L	N	D	L	N	K	S	L	G	L	N	L	N	E	I	K	N	I	N	P	N	N	F	G	D	F	K	Y	C
Template Known Secondary structure		T	T																T	T	G	G	G	G	T																					S	S							T	T	T	T							T	T	T	G	G	G			G	G	G	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		R	G	V	V	K	H	L	Q	L	R	N	N	S	F	.	.	G	G	V	D	M	V	I	S	G	N	V	P	Q	G	A	G	L	S	S	S	A	S	L	E	V	A	V	G	T	V	L	Q	Q	L	Y	H	L	P	L	D	G	A	Q	I	A	L	N	G	Q	E	A	E	N	Q	F	V	G	C	N	C	G	I	M	D
Query Conservation																.	.
Alig confidence																.	.																																																														.
Template Conservation																																																																															.
Template Sequence		L	C	A	I	K	N	T	L	D	Y	L	N	I	E	P	K	T	G	F	K	I	N	I	S	S	K	I	P	I	S	C	G	L	G	S	S	A	S	I	T	I	G	T	I	K	A	V	S	G	F	Y	N	K	E	L	K	D	D	E	I	A	K	L	G	Y	M	V	E	K	E	I	Q	G	K	A	S	I	.	T	D
Template Known Secondary structure												T	T					S										S		S	S	S	S	S																	T	T	T																				S	S	S			S	.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		Q	L	I	S	A	L	G	K	K	D	H	A	L	L	I	D	C	R	S	L	G	T	K	A	V	S	.	.	.	.	M	P	K	G	V	A	V	V	I	I	N	S	N	F	K	R	T	L	V	G	S	E	Y	N	T	R	R	E	Q	C	E	T	G	A	R	F	F	Q	Q	P	A	L	R	D	V	T	I	E	E	F
Query Conservation																												.	.	.	.
Alig confidence										.	.	.																.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	T	I	T	Y	K	G	.	.	.	I	L	E	I	K	N	N	K	F	R	K	I	K	G	E	F	E	E	F	L	K	N	C	K	F	L	I	V	Y	A	E	K	R	K	K	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	L	V
Template Known Secondary structure									S	.	.	.					S	S	S															T													S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.																													.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	V	A	H	E	L	D	P	I	V	A	K	R	V	R	H	I	L	T	E	N	A	R	T	V	E	A	A	S	A	L	E	Q	G	D	L	K	R	M	G	E	L	M	A	E	S	H	A	S	M	R	D	D	F	E	I	T	V	P	Q	I	D	T	L	V	E	I	V	K	A	V	I	G	D	K	G	G	V	R
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.																																		.																			.	.	.
Template Conservation															.	.	.	.	.	.	.	.																																		.																			.	.	.
Template Sequence		N	E	V	A	K	I	E	N	K	D	E	I	F	.	.	.	.	.	.	.	.	K	E	I	D	K	V	I	D	E	A	L	K	I	K	N	K	E	D	F	G	K	L	M	T	K	N	H	E	L	L	K	K	L	.	N	I	S	T	P	K	L	D	R	I	V	D	I	G	N	R	F	G	.	.	.	F	G	A	K
Template Known Secondary structure						T		T	T						.	.	.	.	.	.	.	.															S																	T	T	.	T																	S	.	.	.	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.																																		.																			.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.									.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.				.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	G	G	G	F	G	G	C	I	V	A	L	I	P	E	E	L	V	P	A	V	Q	Q	A	V	A	E	Q	Y	E	A	K	T	G	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	G	A	G	G	G	G	C	V	I	I	L	V	N	E	E	K	E	K	E	L	L	K	E	L	N	K	E	D	V	R	I	F	N	C	R
Template Known Secondary structure				S	S	S	S	S									G	G	G										T	S	S
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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