Job Description P0A6T3 Confidence 100.00% Date Thu Jan 5 11:03:52 GMT 2012 Rank 9 Aligned Residues 295 % Identity 17% Template c1k47F_ PDB info PDB header:transferase Chain: F: PDB Molecule:phosphomevalonate kinase; PDBTitle: crystal structure of the streptococcus pneumoniae2 phosphomevalonate kinase (pmk) Resolution 2.42 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		P	A	T	H	T	I	Q	A	P	G	R	V	N	L	I	G	E	H	T	D	Y	N	.	D	G	F	V	L	P	C	A	I	D	Y	Q	T	V	I	S	C	A	P	R	D	D	R	K	V	R	V	M	A	A	D	Y	E	N	Q	L	D	E	F	S	L	D	A	P	I	V	A	H	E	N	Y	Q	W	A	N	Y	V
Query Conservation																								.
Alig confidence																								.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	X	X	I	A	V	K	T	C	G	K	L	Y	W	A	G	E	Y	A	I	L	E	P	G	Q	L	A	L	I	K	D	I	P	I	Y	X	R	A	E	I	A	F	S	D	S	Y	R	I	Y	S	D	X	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	Y	S	L	I	Q	E	T	I
Template Known Secondary structure																		T	T	G	G	G	S	T	T																				S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1001	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.																		.	.	.	.	.	.	1060	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		R	G	V	V	K	H	L	Q	L	R	N	N	S	F	G	G	V	D	M	V	I	S	G	N	V	P	Q	G	A	.	.	.	G	L	S	S	S	A	S	L	E	V	A	V	G	T	V	L	Q	Q	L	Y	H	L	P	L	D	G	A	Q	I	A	L	N	G	Q	E	A	E	N	Q	F	V	G	C	N	C	G	I	M
Query Conservation																															.	.	.
Alig confidence																															.	.	.																																														.
Template Conservation																																																																															.
Template Sequence		A	L	X	G	D	F	L	A	V	R	G	Q	N	L	R	P	F	S	L	A	I	Y	G	K	X	E	R	E	G	K	K	F	G	L	G	S	S	G	S	V	V	V	L	V	V	K	A	L	L	A	L	Y	N	L	S	V	D	Q	N	L	L	F	K	L	T	S	A	V	L	L	K	R	G	D	N	G	S	.	X	G
Template Known Secondary structure											T	T												S	T	T	T	T	T		S	T	T		S																		T	T																				T			S		.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190																				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Q	L	I	S	A	L	G	K	K	D	H	A	L	L	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	R	S	L	G	T	K	A	V	S	M	P	K	G	V	A	V	V	I	I	N	S	N	F	K	R	T	L	V	G	S	E	Y	N	T	R	R	E	Q	C	E	T	G	A
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	A	C	I	A	A	E	D	L	V	L	Y	Q	S	F	D	R	Q	K	V	A	A	W	L	E	E	E	N	L	A	T	V	L	E	R	D	W	G	F	S	I	S	Q	V	K	P	T	L	E	C	D	F	L	V	G	W	T	K	E	V	A	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	S																			S								S													S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		R	F	F	Q	Q	P	A	L	R	D	V	T	I	E	E	F	N	A	V	A	H	E	L	D	P	I	V	A	K	R	V	R	H	I	L	T	E	N	A	R	T	V	E	A	A	S	A	L	E	Q	G	D	L	K	R	M	G	E	L	M	A	E	S	H	A	S	M	R	D	D	.	F	E	I	T	V	P	Q	I	D
Query Conservation																																																																								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.																															.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	H	X	V	Q	Q	I	K	Q	N	I	N	Q	N	F	L	T	S	S	K	E	T	.	.	.	.	.	.	V	V	S	L	V	E	A	L	E	Q	G	K	S	E	K	I	I	E	Q	V	E	V	A	S	K	L	L	E	G	L	S	T	D	I	Y	T	P	L	L	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.									T	S													.	.	.	.	.	.										T	T																					T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Template SS confidence
														214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.							.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		T	L	V	E	I	V	K	A	V	I	G	D	K	G	G	V	R	M	T	G	G	G	F	G	G	C	I	V	A	L	I	.	P	E	E	L	V	P	A	V	Q	Q	A	V	A	E	Q	Y	E	A	K	T	G	I	K	E	T	F	Y	V
Query Conservation																																	.
Alig confidence												.	.	.																			.																.	.	.	.	.
Template Conservation												.	.	.																																			.	.	.	.	.
Template Sequence		Q	L	K	E	A	S	Q	D	L	Q	.	.	.	A	V	A	K	S	S	G	A	G	G	G	D	C	G	I	A	L	S	F	D	A	Q	S	T	K	T	L	K	N	R	W	A	D	L	.	.	.	.	.	G	I	E	L	L	Y	Q	E
Template Known Secondary structure						T	T	T	T	S	S	.	.	.							S	S		S	S	S								S															.	.	.	.	.	T
Template Predicted Secondary structure												.	.	.																																			.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.				.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.						320	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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