Job Description P0A6T3 Confidence 100.00% Date Thu Jan 5 11:03:52 GMT 2012 Rank 16 Aligned Residues 290 % Identity 20% Template c1fwlD_ PDB info PDB header:transferase Chain: D: PDB Molecule:homoserine kinase; PDBTitle: crystal structure of homoserine kinase Resolution 2.25 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		H	T	I	Q	A	P	G	R	V	N	L	I	G	E	H	T	D	Y	N	D	G	F	V	L	P	C	A	I	D	.	Y	Q	T	V	I	S	C	A	P	R	D	D	R	K	V	R	V	M	A	A	D	Y	E	N	Q	L	D	E	F	S	L	D	A	P	I	V	A	H	E	N	Y	Q	W	A	N	Y	V	R	G	V
Query Conservation																															.
Alig confidence															.	.	.	.	.												.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	V	K	A	P	C	T	S	A	N	L	G	.	.	.	.	.	V	G	F	D	V	F	G	L	C	L	K	E	P	Y	D	V	I	E	V	E	A	I	D	D	K	E	I	I	I	E	V	D	D	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	T	D	P	D	K	N	V	A	G	I	V
Template Known Secondary structure													T	T	.	.	.	.	.	T		T	T	T																		S	S	S							S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S				T	T	T	S
Template Predicted Secondary structure															.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.						20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.															.	.	.	.	.	60	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	H	L	Q	L	R	N	N	S	F	G	G	V	D	M	V	I	S	G	N	V	P	Q	G	A	G	L	S	S	S	A	S	L	E	V	A	V	G	T	V	L	Q	Q	L	Y	H	L	P	L	D	G	A	Q	I	A	L	N	G	Q	E	A	E	N	Q	F	V	G	C	N	C	G	I	M	D	Q	L	I	S	A
Query Conservation
Alig confidence																																																																										.
Template Conservation																																																																										.
Template Sequence		A	K	K	M	I	D	D	F	N	I	G	K	G	V	K	I	T	I	K	K	G	V	K	A	G	S	G	L	G	S	S	A	A	S	S	A	G	T	A	Y	A	I	N	E	L	F	K	L	N	L	D	K	L	K	L	V	D	Y	A	S	Y	G	E	L	A	S	S	G	A	K	H	A	.	D	N	V	A	P	A	I
Template Known Secondary structure									T	T			S									S	S		T	T	S	S	S																		T	T																			T	T	S	S				.
Template Predicted Secondary structure																																																																										.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	K	K	D	H	A	L	L	I	D	C	R	S	L	G	T	K	A	V	S	M	P	K	G	V	A	V	V	I	I	N	S	N	F	K	R	T	L	V	G	S	E	Y	N	T	R	R	E	Q	C	E	T	G	A	R	F	F	Q	Q	P	A	L	R	D	V	T	I	E	E	F	N	A	V	A	H	E	L	D	P
Query Conservation
Alig confidence						.	.																																		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.																																		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	G	F	.	.	T	M	V	T	N	Y	E	P	L	E	V	L	H	I	P	I	D	F	K	L	D	I	L	I	A	I	P	N	I	S	I	N	T	.	.	.	.	.	.	.	.	.	.	.	.	K	E	A	R	E	I	L	P	K	A	V	G	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S		.	.						T	T	T	T									S										S						.	.	.	.	.	.	.	.	.	.	.	.						T	S		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.																																		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.													.	.	.	.	.	.	190	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	A	K	R	V	R	H	I	L	T	E	N	A	R	T	V	E	A	A	S	A	L	E	Q	G	D	L	K	R	M	G	E	L	M	A	E	S	H	A	S	M	R	D	D	F	E	I	T	V	P	Q	I	D	T	L	V	E	I	V	K	A	V	I	G	D	K	G	G	V	R	M	T	G	G	G	F	G	G	C
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																							.																	.	.	.												.	.
Template Conservation		.	.	.	.	.	.	.																																							.																	.	.	.												.	.
Template Sequence		.	.	.	.	.	.	.	D	L	V	N	N	V	G	K	A	C	G	M	V	Y	A	L	Y	N	K	D	K	S	L	F	G	R	Y	M	M	S	D	K	V	I	E	P	V	R	.	G	K	L	I	P	N	Y	F	K	I	K	E	E	V	K	D	.	.	.	K	V	Y	G	I	T	I	S	G	S	G	.	.	P	S
Template Known Secondary structure		.	.	.	.	.	.	.																		T	T										T	T			S	S					.	G	G	G	S	T	T									G	G	.	.	.	G								T	T	S	.	.	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																																							.																	.	.	.												.	.
Template SS confidence
									198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.			.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	A	L	I	P	E	E	L	V	P	A	V	Q	Q	A	V	A	E	Q	Y	E	A	K	T	G	I	K	E	T	F	Y	V	C	K	P	S	Q	G	A
Query Conservation
Alig confidence																								.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.
Template Sequence		I	I	A	F	P	K	E	E	F	I	D	E	V	E	N	I	L	R	D	Y	Y	E	.	.	.	.	.	.	.	N	T	I	R	T	E	V	G	K	G	V
Template Known Secondary structure								G	G	G												S	S	.	.	.	.	.	.	.							B
Template Predicted Secondary structure																								.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.								.	.	.	290	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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