Job Description P0A6T3 Confidence 99.58% Date Thu Jan 5 11:03:52 GMT 2012 Rank 38 Aligned Residues 296 % Identity 18% Template c1fi4A_ PDB info PDB header:lyase Chain: A: PDB Molecule:mevalonate 5-diphosphate decarboxylase; PDBTitle: the x-ray crystal structure of mevalonate 5-diphosphate decarboxylase2 at 2.3 angstrom resolution. Resolution 2.27 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		T	H	T	I	Q	A	P	G	R	V	N	L	I	G	E	H	T	D	Y	N	D	G	.	.	F	V	L	P	C	A	I	D	Y	Q	T	V	I	S	C	A	P	R	D	D	R	K	V	R	V	M	A	A	D	Y	E	N	Q	L	D	E	F	S	L	D	A	P	I	V	A	H	E	N	Y	Q	W	A	N	Y	V	R
Query Conservation																								.	.
Alig confidence																.	.	.	.					.	.
Template Conservation																.	.	.	.
Template Sequence		T	A	S	V	T	A	P	V	N	I	A	T	L	K	.	.	.	.	Y	W	G	K	R	D	T	K	L	N	L	P	T	N	S	S	I	S	V	T	L	S	Q	D	D	L	R	T	L	T	S	A	A	T	A	P	E	F	E	R	D	T	L	W	L	N	G	E	P	H	S	I	D	N	E	R	T	Q	N	C	L	R
Template Known Secondary structure																.	.	.	.							T	T	T	T			S	S							B		T	T	T	S										T	T			S		B		T	T	T			B	S	S	S	S	S	S	S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		98	.	100	.	.	.	.	.	.	.	.	.	110	.									.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.
Query Sequence		G	V	V	K	H	L	Q	L	R	N	N	S	F	G	.	.	.	.	.	.	.	.	G	V	D	M	V	I	S	G	N	V	P	Q	G	A	G	L	S	S	S	A	S	L	E	V	A	V	G	T	V	L	Q	Q	L	Y	H	L	P	L	D	G	A	Q	I	A	L	N	G	Q	E	A	E	N	Q	F	V	G	C	N
Query Conservation																.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.																																																.	.	.	.
Template Conservation																																																																							.	.	.	.
Template Sequence		D	L	R	Q	L	R	K	E	X	E	S	K	D	A	S	L	P	T	L	S	Q	W	K	L	H	I	V	S	E	N	N	F	P	T	A	A	G	L	A	S	S	A	A	G	F	A	A	L	V	S	A	I	A	K	L	Y	Q	L	P	Q	S	T	S	E	I	S	R	I	A	.	.	.	.	R	K	G	S	G	S	A
Template Known Secondary structure												T	T		T	T	S			G	G	G	S												T	T	S																				T	T			S										.	.	.	.					G	G	G
Template Predicted Secondary structure																																																																							.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																						.	.	.												.	.	.	.
Query SS confidence																						.	.	.												.	.	.	.
Query Sequence		C	G	I	M	D	Q	L	I	S	A	L	G	K	K	D	H	A	L	L	I	.	.	.	D	C	R	S	L	G	T	K	A	V	S	.	.	.	.	M	P	K	G	V	A	V	V	I	I	N	S	N	F	K	R	T	L	V	G	S	E	Y	N	T	R	R	E	Q	C	E	T	G	A	R	F	F	Q	Q	P	A	L
Query Conservation																						.	.	.												.	.	.	.
Alig confidence			.		.	.	.	.	.													.	.	.												.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.		.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	.	R	.	.	.	.	.	S	L	F	G	G	Y	V	A	W	E	X	G	K	A	E	D	G	H	D	S	X	A	V	Q	I	A	D	S	S	D	W	P	Q	X	K	A	C	V	L	V	V	S	D	I	K	K	D	V	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	.	G	.	.	.	.	.	G	G	S	S	S								S		T	T		T	T									G	G	G	S	T	T												S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.		.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157		.						.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.								.	310	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.
Query Sequence		R	D	V	T	I	E	E	F	N	A	V	A	H	E	L	D	P	I	V	A	K	R	V	R	H	I	L	T	E	N	A	R	T	V	E	A	A	S	A	L	E	Q	G	D	L	K	R	M	G	E	L	M	A	E	S	H	A	S	M	R	D	D	F	E	I	T	.	.	.	.	.	.	.	V	P	Q	I	D	T	L
Query Conservation																																																																				.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																																												.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	T	Q	G	X	Q	L	T	V	A	T	S	E	L	F	K	E	R	I	E	H	V	V	P	K	R	F	E	V	X	R	K	A	I	V	E	K	D	F	A	T	F	A	K	E	T	X	X	D	S	N	S	F	H	A	T	C	L	D	S	F	P	P	I	F	Y	X	N	D	T	S	K	R	I
Template Known Secondary structure		.	.	.	.	.	.	.												S								T															T	T																						T	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		316	.	.	.	320	.	.	.	.				.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		V	E	I	V	K	A	V	I	G	.	.	.	D	K	G	G	V	R	M	T	G	G	G	F	G	G	C	I	V	A	L	I	P	E	E	L	V	P	A	V	Q	Q	A	V	A	E	Q	Y
Query Conservation											.	.	.
Alig confidence											.	.	.												.	.
Template Conservation																									.	.
Template Sequence		I	S	W	C	H	T	I	N	Q	F	Y	G	E	T	I	V	A	Y	T	F	D	A	G	.	.	P	N	A	V	L	Y	Y	L	A	E	N	E	S	K	L	F	A	F	I	Y	K	L	F
Template Known Secondary structure													T	S									S	S	.	.	S								G	G	G
Template Predicted Secondary structure																									.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions