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5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | I | P | A | A | P | V | T | V | V | E | E | I | K | K | S | R | F | I | T | M | L | A | H | T | D | G | V | E | A | A | K | A | F | V | E | S | V | R | A | E | H | P | D | A | R | H | H | C | V | A | W | V | A | G | A | P | D | D | S | Q | Q | L | G | F | S | D | D | G | E | P | A | G | T | A | G | K | P | M | L |
Query Conservation |   |
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Alig confidence |   |
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| . | . |
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Template Conservation |   |
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|   |   |   |   |
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| . | . |   |   |   |
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Template Sequence |   |
L | T | L | A | D | K | V | V | Y | E | E | E | I | Q | K | S | R | F | I | A | K | A | A | P | V | A | S | E | E | E | A | L | A | F | L | A | E | N | R | . |
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E | P | E | A | T | H | N | G | H | A | Y | K | I | G | . |
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L | L | Y | R | F | S | D | D | G | E | P | S | G | T | A | G | R | P | I | L |
Template Known Secondary structure |   |
 |  |  | S | S |
|  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
| T | T | S | S |  |  |  |  |  |  |  |  | T | . | . | . | . | . | T |  |  |  |  |  |
| T | T | S | S | T | T | S | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
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. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
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. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
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  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
A | Q | L | M | G | S | G | V | G | E | I | T | A | V | V | V | R | Y | Y | G | G | I | L | L | G | T | G | G | L | V | K | A | Y | G | G | G | V | N | Q | A | L | R | Q | L | T | T | Q | R | K |
Query Conservation |   |
  |   |
|   |   |   |   |
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Alig confidence |   |
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Template Conservation |   |
  |   |
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Template Sequence |   |
H | A | I | E | A | Q | G | L | D | R | V | A | V | L | V | V | R | Y | F | G | G | V | K | L | G | A | G | G | L | V | R | A | Y | G | G | V | A | A | E | A | L | R | R | A | P | K | V | P | L |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | B |
| S |  |  |  |  |  |  |  |  |
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| S | S |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
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Template Predicted Secondary structure |   |
 |  |  |  |  |
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Template SS confidence |   |
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  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
  |