Return to main results Retrieve Phyre Job Id

Job DescriptionP27862
Confidence96.74%DateThu Jan 5 11:44:25 GMT 2012
Rank15Aligned Residues68
% Identity22%Templatec2ywfA_
PDB info PDB header:translationChain: A: PDB Molecule:gtp-binding protein lepa; PDBTitle: crystal structure of gmppnp-bound lepa from aquifex aeolicus
Resolution2.24 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160....... ..170.........180. ........190.........200
Predicted Secondary structure 


..


.

Query SS confidence 


































. .













.


















Query Sequence  KTPLTEYTLQCEYHQLTGIEALLGQCDGKIINSDY. . QAFVLLRVALPAAK. VAEFSAKLADFSRGSLQLL
Query Conservation          
   
     
   
      
    
..   
 
 
      .       
  

 
 
 
 
Alig confidence 


































..













.


















Template Conservation 



    
  
 
  
 
   
  


 
            
 
  



    
   


 
 
 

  
Template Sequence  EEPFVLVTIITPKEYVGPIIQLCQEKRGIQKNMTYLDPNTVYLEYEMPLSEIIVDFHDKIKSISRGFASYD
Template Known Secondary structure  GGGTT
TTTTT

Template Predicted Secondary structure 












Template SS confidence 






































































   404.....410.........420.........430.........440.........450.........460.........470....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions