Job Description P27862 Confidence 93.55% Date Thu Jan 5 11:44:25 GMT 2012 Rank 23 Aligned Residues 67 % Identity 18% Template c2wbmA_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:ribosome maturation protein sdo1 homolog; PDBTitle: crystal structure of mthsbds, the homologue of the2 shwachman-bodian-diamond syndrome protein in the3 euriarchaeon methanothermobacter thermautotrophicus Resolution 1.75 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		L	T	E	Y	T	L	Q	C	E	Y	H	Q	L	T	G	I	E	A	L	L	G	Q	C	D	G	K	I	I	N	S	D	Y	Q	A	F	.	.	V	L	L	R	V	A	L	P	A	A	K	V	A	E	F	S	A	K	L	A	D	F	S	R	G	S	L	Q	L	L	A	I	E
Query Conservation																																					.	.
Alig confidence																										.											.	.
Template Conservation																										.
Template Sequence		K	V	R	V	A	I	K	I	P	G	E	M	A	G	S	A	Y	G	V	I	S	N	F	G	.	K	I	T	N	E	E	W	Q	N	D	G	S	W	I	A	V	V	E	I	P	G	G	L	Q	D	S	F	Y	Q	K	L	S	E	L	T	G	G	N	V	E	T	R	L	I	K
Template Known Secondary structure											G	G	G													.									T	T	S										G	G	G												T	T	T
Template Predicted Secondary structure																										.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions