Job Description P27862 Confidence 100.00% Date Thu Jan 5 11:44:25 GMT 2012 Rank 2 Aligned Residues 189 % Identity 35% Template c2cveA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ttha1053; PDBTitle: crystal structure of a conserved hypothetical protein tt1547 from2 thermus thermophilus hb8 Resolution 1.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	P	A	A	P	V	T	V	V	E	E	I	K	K	S	R	F	I	T	M	L	A	H	T	D	G	V	E	A	A	K	A	F	V	E	S	V	R	A	E	H	P	D	A	R	H	H	C	V	A	W	V	A	G	A	P	D	D	S	Q	Q	L	G	F	S	D	D	G	E	P	A	G	T	A	G	K	P	M	L
Query Conservation
Alig confidence																																						.	.																			.	.	.	.	.
Template Conservation																																						.	.																			.	.	.	.	.
Template Sequence		L	T	L	A	D	K	V	V	Y	E	E	E	I	Q	K	S	R	F	I	A	K	A	A	P	V	A	S	E	E	E	A	L	A	F	L	A	.	.	E	N	R	E	P	E	A	T	H	N	G	H	A	Y	K	I	G	L	.	.	.	.	.	L	Y	R	F	S	D	D	G	E	P	S	G	T	A	G	R	P	I	L
Template Known Secondary structure					S	S									T	T											S	S										.	.					T	T	S	S									T	T	.	.	.	.	.							T	T	S	S	T	T	S	S
Template Predicted Secondary structure																																						.	.																			.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	M	G	S	G	V	G	E	I	T	A	V	V	V	R	Y	Y	G	G	I	L	L	G	T	G	G	L	V	K	A	Y	G	G	G	V	N	Q	A	L	R	Q	L	T	T	Q	R	K	T	P	L	T	E	Y	T	L	Q	C	E	Y	H	Q	L	T	G	I	E	A	L	L	G	Q	C	D	G	K	I	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	A	I	E	A	Q	G	L	D	R	V	A	V	L	V	V	R	Y	F	G	G	V	K	L	G	A	G	G	L	V	R	A	Y	G	G	V	A	A	E	A	L	R	R	A	P	K	V	P	L	V	E	R	V	G	L	A	F	L	V	P	F	A	E	V	G	R	V	Y	A	L	L	E	A	R	A	L	K	A	E	E
Template Known Secondary structure							T	T	B		S											S	S																						S																	G	G	G											T	T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	Y	Q	A	F	V	L	L	R	V	A	L	P	A	A	K	V	A	E	F	S	A	K	L	A	D	F	S	R	G	S	L	Q	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Y	T	P	E	G	V	R	F	A	L	L	L	P	K	P	E	R	E	G	F	L	R	A	L	L	D	A	T	R	G	Q	V	A	L	E
Template Known Secondary structure					T	T																								T	T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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