|   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |
Query SS confidence |   |
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Query Sequence |   |
L | Y | P | S | L | K | D | S | Y | W | L | S | L | N | Y | G | M | Q | E | A | A | R | R | Y | G | V | D | L | K | V | L | E | A | G | G | Y | S | Q | L | A | T | Q | Q | A | Q | I | D | Q | C | K | Q | W | G | A | E | A | I | L | L | G | S | S | T | T | S | F | P | D | L | Q | K | Q | V | A | S | L | P | V | I | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
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|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
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|   |   |   |
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|   |
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|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
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| . | . | . | . | . | . | . |
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Template Conservation |   |
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|   |   |   |
|   |   |
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|   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |
|   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
V | I | A | A | V | V | S | N | F | A | Q | Q | I | L | D | G | I | Q | E | E | A | H | K | N | G | Y | N | L | I | I | V | Y | E | . |
. |
. |
. |
. |
. |
. |
E | Q | K | H | A | L | L | T | A | I | E | R | P | V | X | G | I | L | L | L | S | I | A | L | T | D | D | N | L | Q | L | L | Q | S | S | D | V | P | Y | C |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|
|  |  |  |  |
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | S |
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| S |  |  |  |  |  | S |
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|  |  |  |  |  |  |  |  |  | T | T |
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|  |  |
Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
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. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
  |
  |   |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | |
. | . | . | . | . |
Predicted Secondary structure |   |
 |  |
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|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |
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| . |
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Query SS confidence |   |
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| . |
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Query Sequence |   |
L | V | N | A | I | D | A | P | Q | V | K | S | R | V | G | V | P | W | F | Q | M | G | Y | Q | P | G | R | Y | L | V | Q | W | A | H | G | K | P | L | N | V | L | L | M | P | G | P | D | N | A | G | G | S | K | E | M | V | E | G | F | R | A | A | I | A | G | S | P | V | R | I | V | D | I | A | . |
L | G | D | N | D |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |
Alig confidence |   |
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| . | . | . |
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| . |
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Template Conservation |   |
  |   |   |   |   |   |   |   |   |   | . |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   | . | . | . |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
F | L | S | X | G | F | D | D | D | R | . |
P | F | I | S | S | D | D | E | D | I | G | Y | Q | A | T | N | L | L | I | N | E | G | H | R | Q | . |
. |
. |
I | G | I | A | G | I | D | Q | Y | P | Y | T | G | R | K | R | L | A | G | Y | K | K | A | L | K | E | A | N | I | A | I | N | Q | E | W | I | K | P | G | D | Y |
Template Known Secondary structure |   |
 |  | S |
|
|
| S | S | S |
| . |
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
| S | . | . | . |  |  |  |  | S |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
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|
| G | G | G |  |  |
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| S |
Template Predicted Secondary structure |   |
 |  |  |
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| . |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  | . | . | . |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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Template SS confidence |   |
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  |   |
146 | . | . | . | 150 | . | . | . | . | . | |
. | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
|
|
. | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . |
  |
  |   |
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | |
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. | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
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| . |
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. |
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. |
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Query Sequence |   |
I | E | I | Q | R | N | L | L | Q | E | M | L | E | R | H | P | E | I | D | V | V | A | G | T | A | I | A | A | E | A | A | M | G | E | G | R | . |
. |
. |
. |
. |
. |
. |
N | L | K | T | P | L | T | V | V | S | F | Y | L | S | H | Q | V | Y | R | G | L | K | R | G | R | V | I | M | A | A | S | D | Q | M | V | W | Q |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
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|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |
|   |   |   |   |   |
Alig confidence |   |
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| . | . |
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| . | . | . | . | . | . | . |
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| . | . | . |
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Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   | . | . |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |
|   |
|
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|
|   |   |   |   |   |   |   |
Template Sequence |   |
S | Y | T | S | G | E | Q | A | X | K | A | F | G | K | N | T | D | L | T | G | I | I | A | . |
. |
A | S | D | X | T | A | I | G | I | L | N | Q | A | S | S | F | G | I | E | V | P | K | D | L | S | I | V | S | I | D | G | T | E | . |
. |
. |
X | C | K | I | T | R | P | Q | L | T | S | I | S | Q | D | F | F | Q | X |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|
| S |  |  |  |  | . | . | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T | T | T |
|  |  |  |  |  |  |
|
| G | . | . | . | G | G | G | S | S | S | S |
|
|  |  |  |  |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  | . | . |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  | . | . | . |  |  |  |  |
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|  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
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  |   |
222 | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | |
|
. | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | |
|
|
. | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . |
  |
  |   |
282 | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | |
|
. | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|
|
|
|  |  |
|
|  |  |  |  |
|  |  |  |
|
|  |
Query SS confidence |   |
|
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| . |
. |
|
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|
Query Sequence |   |
G | E | L | A | V | E | Q | A | I | R | Q | L | Q | G | Q | S | . |
. |
V | S | D | N | V | S | P | P | I | L | V | L | T | P | K | N | A | D | R |
Query Conservation |   |
|   |   |
|
|   |   |   |   |   |   |
|   |
|   |   | . | . |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
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| . | . |
|
|
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|
|
Template Conservation |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|
|   |   |
Template Sequence |   |
G | V | T | G | V | Q | Q | I | H | Q | S | V | K | N | G | S | N | R | I | V | S | Q | Q | F | I | P | V | N | P | V | I | R | K | S | T | A | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |
|
| S | S |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |
|
|  |  |  |  |
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Template SS confidence |   |
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297 | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . |
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