52 c3clkB_ Probab=99.97   E-value=1.1e-27  Score=170.95  Aligned_columns=251  Identities=14%

Q ss_pred             EECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHCCCCEEE
Q ss_conf             97888997899999999999998698799963898762899999999999779963220468842367898621774278
Q batch____        50 LYPSLKDSYWLSLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVASLPVIE  129 (342)
Q Consensus        50 ~~~~~~~~f~~~~~~g~~~aa~~~G~~~~~~~~~~~~~~~~q~~~i~~~i~~~vd~iii~~~d~~~~~~~~~~~~~~~i~  129 (342)
                      ++|+++||||..+.+|++++++++|+++.+...       .+.+.+++++.+++||+|+.+.+.............+.+.
T Consensus         1 iipdl~~~f~~~i~~gi~~~a~~~g~~l~i~~~-------~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~v~   73 (262)
T c3clkB_           1 VIAAVVSNFAQQILDGIQEEAHKNGYNLIIVYE-------EQKHALLTAIERPVXGILLLSIALTDDNLQLLQSSDVPYC   73 (262)
T ss_dssp             CEEEEECCHHHHHHHHHHHHHTTTTCCEEEECC-------HHHHHHHHHHHSCCSEEEEESCCCCHHHHHHHHHTTCCEE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC-------CHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCEEE
T ss_conf             988778845999999999999987988999974-------4699999998569979998188653035899985498299


Q ss_pred             EECCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECC-CCCCC
Q ss_conf             85224687850698557799999999999996233577132036766606699999999999841376200011-13569
Q batch____       130 LVNAIDAPQVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIA-LGDND  208 (342)
Q Consensus       130 v~~~~~~~~~~~~V~~d~~~~g~~~a~~l~~~~~~~~~~v~~~~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~-~~~~~  208 (342)
                      +......... ++|+.|++.+|+.+++++.++++++   +.++.+.......++|.+||++++.+++....... ...+.
T Consensus        74 ~~~~~~~~~~-~~V~~d~~~~~~~~~~~l~~~g~~~---i~~i~~~~~~~~~~~r~~g~~~~~~~~~~~~~~~~~~~~~~  149 (262)
T c3clkB_          74 FLSXGFDDDR-PFISSDDEDIGYQATNLLINEGHRQ---IGIAGIDQYPYTGRKRLAGYKKALKEANIAINQEWIKPGDY  149 (262)
T ss_dssp             EESCCCSSSC-CEEECCHHHHHHHHHHHHHTTTCCS---EEEESCCCSSHHHHHHHHHHHHHHHHTTCCCCGGGEECCCS
T ss_pred             EEECCCCCCC-CEEEECCHHHHHHHHHHHHHHCCCE---EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCC
T ss_conf             9624677765-5788751678889999999606983---99975878867689999999999987398667227853898


Q ss_pred             HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH-------CCCCCEEEEEECCCHHHHHHHHCCCCEEEEECCHHHH
Q ss_conf             899999999988416896199994130899999984-------2789848999329989999997398319996198999
Q batch____       209 IEIQRNLLQEMLERHPEIDVVAGTAIAAEAAMGEGR-------NLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQ  281 (342)
Q Consensus       209 ~~~~~~~~~~~l~~~pdid~i~~~~~~~~~a~~~~~-------~~~~~i~v~g~d~~~~~~~~i~~G~~~~tv~q~~~~~  281 (342)
                      ...+......++..+|++++|++  .++.++.++..       ..++++.++|+|+.+   ..-...+..++|.|++..+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~aii~--~~d~~a~~~~~~l~~~g~~~p~di~i~~~~~~~---~~~~~~p~ltti~~~~~~~  224 (262)
T c3clkB_         150 SYTSGEQAXKAFGKNTDLTGIIA--ASDXTAIGILNQASSFGIEVPKDLSIVSIDGTE---XCKITRPQLTSISQDFFQX  224 (262)
T ss_dssp             SHHHHHHHHHHHCTTCCCSEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEEEEECCG---GGGSSSSCCEEEECCHHHH
T ss_pred             CHHHHHHHHHHHHCCCCCCEEEE--ECCCCHHHHHHHHHHHCCCCCCEEEEEECCCHH---HHHHCCCCEEEEECCHHHH
T ss_conf             88999999999850689969999--417101168999998189887379998238803---5642488602886198999


Q ss_pred             HHHHHHHHHHHHCCCC--CCCCEECCEEEECHHHCCH
Q ss_conf             9999999999983889--9743007827668678270
Q batch____       282 GELAVEQAIRQLQGQS--VSDNVSPPILVLTPKNADR  316 (342)
Q Consensus       282 G~~av~~~~~~l~G~~--~~~~~~~p~~~vt~~n~~~  316 (342)
                      |+.|++++++.++|++  +++.+.+|..+|.++++.+
T Consensus       225 g~~A~~~L~~~i~~~~~~~~~~~~i~~~lv~R~St~~  261 (262)
T c3clkB_         225 GVTGVQQIHQSVKNGSNRIVSQQFIPVNPVIRKSTAR  261 (262)
T ss_dssp             HHHHHHHHHHHHHTSCCCCCCEEECCCEEECCSSCCC
T ss_pred             HHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCCCCC
T ss_conf             9999999999994899888748998228997573345