|   |
49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
|
|
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | D | Q | T | A | A | L | R | D | S | L | S | D | K | P | A | K | N | I | I | L | L | I | G | D | G | M | G | D | S | E | I | T | A | A | R | N | Y | A | E | G | A | G | G | F | F | . |
. |
. |
. |
K | G | I | D | A | L | P | L | T | G | Q | Y | T | H | Y | A | L | N | K | K | T | G | K | P | D | Y | V | T | D | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |   |   |
|
|
|
|   |
|   |   |
|   |   |
|   |   | . | . | . | . |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |
|   |
|   |
| . | . | . | . | . | . |   |   |
|
|
|
|
Template Sequence |   |
D | A | L | D | K | Q | L | G | I | K | L | R | E | K | Q | A | K | N | V | I | F | F | L | G | D | G | M | S | L | S | T | V | T | A | A | R | I | Y | K | G | G | L | T | G | K | F | E | R | E | K | I | S | W | E | E | F | D | F | A | A | L | S | K | T | Y | N | T | D | . |
. |
. |
. |
. |
. |
K | Q | V | T | D | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
|
|
|
|
| S |
|
| S |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| G | G | G |
|
|
| G | G | G | G | S | S |  |  |  |  |  |  |
|
|
| S | S | . | . | . | . | . | . |
| S | S |
|
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
|
|
|
|
|
. | . | . | . | . | . |
  |
  |   |
125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | S | A | T | A | W | S | T | G | V | K | T | Y | N | G | A | L | G | V | D | I | H | E | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | H | P | T | I | L | E | M | A | K | A | A | G | L | A | T | G | N | V | S | T | A | E | L | Q | D | A | T | P | A | A | L | V | A | H | V | T | S | R | K | C | Y | G |
Query Conservation |   |
|
|   |
|
|
|   |
|
|
|   |
|
|   |
|
|   |
|
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|
|
|
|   |
|
|   |   |
|   |   |
|
|
|
|
|
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |
|
|
|   |
|
|   |
|
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |
|   |   |
|
|
|
|
|
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |
Template Sequence |   |
A | A | S | A | T | A | Y | L | T | G | V | K | T | N | Q | G | V | I | G | L | D | A | N | T | V | R | T | N | C | S | Y | Q | L | D | E | S | L | F | T | Y | S | I | A | H | W | F | Q | E | A | G | R | S | T | G | V | V | T | S | T | R | V | T | H | A | T | P | A | G | T | Y | A | H | V | A | D | R | D | W | E | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | S |
|
|
|
| T | T |
| B | S | B |
| T | T |
|
| T | T |
| G | G | G | G | G |
| G | G | G | B |
|
|
|  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  | T | T | T |
|
| B | S |
| T | T |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
  |
  |   |
193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
|
|
|
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 250 | . | |
|
|
|
|
|
. | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
Query Sequence |   |
P | S | A | T | S | E | K | C | P | G | N | A | L | E | K | G | G | K | G | S | I | T | E | Q | L | L | N | . |
. |
. |
. |
A | R | A | D | V | T | L | G | G | G | A | K | T | F | A | E | T | A | T | A | G | . |
. |
. |
. |
. |
. |
. |
. |
E | W | Q | G | K | T | L | R | E | Q | A | . |
. |
. |
. |
. |
. |
Q | A | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   | . | . | . | . |   |   |   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |
|   |   |
|
|   |   |   |   | . | . | . | . | . | . |   |   |   |
Alig confidence |   |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
Template Conservation |   |
  |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
D | S | D | . |
. |
. |
. |
V | V | H | D | R | E | D | P | E | I | C | D | D | I | A | E | Q | L | V | F | R | E | P | G | K | N | F | K | V | I | M | G | G | G | R | R | G | F | F | P | E | E | A | L | D | I | E | D | G | I | P | G | E | R | E | D | G | K | H | L | I | T | D | W | L | D | D | K | A | S | Q | G | A |
Template Known Secondary structure |   |
 |  |  | . | . | . | . |  |  |  | T | T |
|
| T | T | T | S |
|
|  |  |  |  |  |  |  | S | T | T | G | G | G |
| S |  |  |  |  |  |
| G | G | G | G | S | B | T | T | S | B |
| T | T | T |
|
| B |
| S | B | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
167 | . | . | |
|
|
|
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . |
  |
  |   |
255 | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Y | Q | L | V | S | D | A | A | S | L | N | S | V | T | E | A | N | Q | Q | K | P | L | L | G | L | F | A | D | G | N | M | P | V | R | W | L | G | P | K | A | T | Y | H | G | N | I | D | K | P | A | V | T | C | T | P | N | P | Q | R | N | D | S | V | P | T | L | A | Q | M | T | D | K | A | I | E | L | L | S | K |
Query Conservation |   |
|
|   |   |
|   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|   |
|
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |   |   |
|
|   |   |   | . |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |
|   |   |   |   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|
|   |
|
|
|   |
|
|
|   |   |
|   |   |
Template Sequence |   |
T | A | S | Y | V | W | N | R | D | D | L | L | A | V | . |
D | I | A | N | T | D | Y | L | M | G | L | F | S | Y | T | H | L | D | T | V | L | T | R | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | E | M | D | P | T | L | P | E | M | T | K | V | A | I | E | M | L | T | K |
Template Known Secondary structure |   |
|  |  |  |  |
| S |  |  |  |  |  | T |
| . |
| S | T | T |
| S |  |  |  |  |  |
|
| S | S | S |
|
|
| T | T | T |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|  |  |  |  |  |  |
| . |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
243 | . | . | . | . | . | . | 250 | . | . | . | . | . | . | |
. | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 |
  |
  |   |
335 | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | E | K | G | F | F | L | Q | V | E | G | A | S | I | D | K | Q | D | H | A | A | N | P | C | G | Q | I | G | E | T | V | D | L | D | E | A | V | Q | R | A | L | E | F | A | K | K | E | G | N | T | L | V | I | V | T | A | D | H | A | H | A | S | Q | I | V | A | P | D | T | K | A | P | G | L | T | Q | A | L | N | T |
Query Conservation |   |
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|   |
|   |
|
|   |   |   |   |
|   |
|   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|   |
|   |
|
|   |   |   |   |
|   |
|   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   | . |
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | E | N | G | F | F | L | L | V | E | G | G | R | I | D | H | M | H | H | A | N | Q | I | R | Q | S | L | A | E | T | L | D | M | E | E | A | V | S | M | A | L | S | M | T | D | P | E | . |
E | T | I | I | L | V | T | A | D | H | G | H | T | L | T | I | T | G | Y | A | D | R | N | T | D | I | L | D | F | A | G | I |
Template Known Secondary structure |   |
| T | T |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T | . | T |  |  |  |  |  |  |  | S | S |  |  |
|  |  |  |
| S |
|
|
| T | T |
|
| T | T | S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
301 | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | |
. | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . |
  |
  |   |
415 | . | . | |
|
|
. | . | 420 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . |
Predicted Secondary structure |   |
|
|
| . | . | . |
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | D | G | . |
. |
. |
A | V | M | V | M | S | Y | G | N | S | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | D | S | Q | E | H | T | G | S | Q | L | R | I | A | A | Y | G | P | H | A | A | N | V | V | G | L | T | D | Q | T | D | L | F |
Query Conservation |   |
  |
|
| . | . | . |   |   |   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|
|
|   |
|
|   |
|   |
|   |
|
|   |
|   |   |
|   |
|   |   |
|
|
|   |
|   |
Alig confidence |   |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |
|
|
|   |
|
|
|
|   |
|   |
|
|
|
|   |   |
|   |
|   |   |
|
|
|
|
|   |
Template Sequence |   |
S | D | L | D | D | R | R | Y | T | I | L | D | Y | G | S | G | P | G | Y | H | I | T | E | D | G | K | R | Y | E | P | T | E | E | D | L | K | D | I | N | F | R | Y | A | S | A | A | P | K | H | S | A | T | H | D | G | T | D | V | G | I | W | V | N | G | P | F | A | H | L | F | T | G | V | Y | E | E | N | Y | I | P |
Template Known Secondary structure |   |
| T | T | T |
|
|  |  |  | S |  |  |  | S | S | B | T | T |
|
| B |
| T | T | S | S | B |
|
|
|
|  |  |  |  |  |
| T | T |
|
|
|
| B | S | S | B |
| S | S |
|
|  |  |
| S |
|  |  |  |  |  |  | S | T | T | G | G | G |
| S | S |  |  |  | T | T |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . |
  |
  |   |
462 | . | . | . | . | . | . | . | 470 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | T | M | K | A | A | L | G | L |
Query Conservation |   |
  |   |
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |
|
Template Sequence |   |
H | A | L | A | Y | A | A | C | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
460 | . | . | . | . | . | . | . | . |
  |