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Job DescriptionP00634
Confidence98.97%DateWed Jan 25 15:20:09 GMT 2012
Rank30Aligned Residues257
% Identity21%Templatec3b5qB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative sulfatase yidj; PDBTitle: crystal structure of a putative sulfatase (np_810509.1)2 from bacteroides thetaiotaomicron vpi-5482 at 2.40 a3 resolution
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90.........100.........110.........120.........130.... .
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Query Sequence  PAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTG. . . . . . . V
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Template Sequence  EKPNFLIIQCDHLTQRVVGAY. . . . GQTQGCTLPIDEVASRGVIFSNAYV. . . . . . . GCPLSQPSRAALWSGXXPHQTNV
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TT

TTTSGGG....SS
SSS
SBS
BB
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SSTS
T
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   14.....20.........30.... .....40.........50......... 60.........70.........80..
 
   136...140.........150.........160.........170.........180.........190.........200.........210.....
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Query Sequence  KTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITE
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Template Sequence  RSNSSEPVNTRLPENVPTLGSLFSESGYEAVHFGK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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SS

TTTS



TTS

TT

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   83......90.........100.........110.......
 
   216...220.........230.........240.........250.........260.........270.........280.........290.....
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Query Sequence  QLLNARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . THDXGSLR
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TTTTT
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   118.120.....
 
   296...300.........310.........320.........330.... .....340....
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Query Sequence  TYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSK. NEKGFFLQVE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GFKHKEPVAKPFTDPEFPVNNDSFLDVGTCEDAVAYLSNPPKEPFICIADFQNPHNICGFIGENAGVHTDRPISGPLPEL
Template Known Secondary structure  TS








SSS


S

SSS
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   126...130.........140.........150.........160.........170.........180.........190.........200.....
 
   345....350.........360.........370.........380.. .......390...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . GASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEG. . . NTLVIVTADHA
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Template Sequence  PDNFDVEDWSNIPTPVQYICCSHRRXTQAAHWNEENYRHYIAAFQHYTKXVSKQVDSVLKALYSTPAGRNTIVVIXADHG
Template Known Secondary structure 
TT
S
S
GGGS
T
TT

TTSTTGGGS

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   206...210.........220.........230.........240.........250.........260.........270.........280.....
 
   394.....400.........410.........420.........430.........440.........450...... ...460.......
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Query Sequence  HASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAANVVGLTD. . . . . . QTDLFYTMKAA
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Template Sequence  DGXASHR. . . . . . . . . . . . . . . . . . . . . . . . XVTKHISFYDEXTNVPFIFAGPGIKQQKKPVDHLLTQPTLDLLPTLCDL
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TTGGG........................

S
SS


B

STT



SS
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B
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   286...290.. .......300.........310.........320.........330.........340.
 
   468.470.
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Query Sequence  LGLK
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Template Sequence  AGIA
Template Known Secondary structure  T

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   342...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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