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Job DescriptionP00634
Confidence100.00%DateWed Jan 25 15:20:09 GMT 2012
Rank8Aligned Residues343
% Identity37%Templatec3a52A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cold-active alkaline phosphatase; PDBTitle: crystal structure of cold-active alkailne phosphatase from2 psychrophile shewanella sp.
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70.........80.........90.. .......100.........110.........120.........130.........140..
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Query Sequence  NIILLIGDGMGDSEITAARNYAEGAGG. . . FFKGIDALPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGAL
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Template Sequence  GMIIMVGDGMGPAYTSAYRYFQDNPDTEEIEQTVFDRLL. VGMASTYPARES. . . . GYVTDSAASATALATGFKSYNGAI
Template Known Secondary structure  TT



TTSSS



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GGG....
S


S



TT
B
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   2.......10.........20.........30.........40 .........50.. .......60.........70......
 
   143......150.........160.........170.........180.........190.........200.........210.........220..
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Query Sequence  GVDIHEKDHPTILEMAKAAGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLLNARA
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Template Sequence  AVDINKRPLTTIMQMAKARGMSTGVAVTAQVNHATPAAFLTHNESRKNYEA. . . . . . . . . . . . . . . . . . . IAADMLKSDA
Template Known Secondary structure  SB
TT

B


TT
TTS

BS
TT
...................T
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   77..80.........90.........100.........110.........120....... ..130.......
 
   223......230.........240.........250.........260.........270.........280.........290.........300..
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Query Sequence  DVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGNID
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Template Sequence  DVILGGGRKYF. . . . . . . . . . SEALVSQFSAKGYQHITELAQLDS. . . . ITQPKVLGLFAEVQLPWVIDD. . . . . . . . . .
Template Known Secondary structure  S
GGG
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TT

SGGGGGG....

SS

SSSS


GGGS..........
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   138.140........ .150.........160.........170.. .......180.........190...
 
   303......310.........320.........330.........340.........350.........360.........370.........380..
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Query Sequence  KPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEG
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Template Sequence  . . . . . . . . . . . . . TDANTLSKLTQKSLDLLSQNEKGFVLLVEGSLIDWAGHNNDIATAMAEMQGFANAIEVVEQYIRQHP
Template Known Secondary structure  .............S
S
TT
TT
TTT


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   194.....200.........210.........220.........230.........240.........250.........260
 
   383......390.........400.........410.........420....
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Query Sequence  NTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVMVMSY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  DTLLVVTADHNTGGLSIGANGEYQWDTKLPKGISASPASIATHAIAADDWQAGVNQQLGFDVNSTELQQLTNARMQGKST
Template Known Secondary structure  S
S
TT
SBTTB




T

S

SS
TS



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   261........270.........280.........290.........300.........310.........320.........330.........340
 
   425....430.........440.........450.........460.........
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Query Sequence  . . . . . . . . . . . . GNSEEDSQEHTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALG
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Template Sequence  LEVALKKIIDTRSYTGWTTSGHTGVDVQVFAMGPAADLFKGNQDNTHIAEKMMSLLP
Template Known Secondary structure  T
S
SS


STTGGGG
TS
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   341........350.........360.........370.........380.........390.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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