Return to main results Retrieve Phyre Job Id

Job DescriptionP25746
Confidence26.96%DateThu Jan 5 11:42:34 GMT 2012
Rank5Aligned Residues87
% Identity22%Templatec2rdcA_
PDB info PDB header:lipid binding proteinChain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative lipid binding protein (gsu0061) from2 geobacter sulfurreducens pca at 1.80 a resolution
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   86...90...... ...100.........110.........120.........130....... ..140.........150...
Predicted Secondary structure  .....






.......






Query SS confidence 










. . . . .








































. . . . . . .















Query Sequence  TRYTLSLMVLE. . . . . RKLSSAKGALDTLGNRINGLQRQLEHFDLQSETLMSAMAAI. . . . . . . YVDVISPLGPRIQVTG
Query Conservation   

   

 

.....


 
    
  
  

     
  

   
  


 

 
.......
 



 
 


 
 
Alig confidence 










.....























......










.......















Template Conservation 
 
  

  

  


 




 




  
 


 
  
......






  




 





 
 


  




Template Sequence  TRYFSKVVEXEHRXASARFRLDGEELRELTETLDRSRRLA. . . . . . HESLISSLHVFNRYIVKEYGEELKEAGIEGGIFP
Template Known Secondary structure  TTTS
......TT
TTTTS
Template Predicted Secondary structure 

......








Template SS confidence 















































































   51........60.........70.........80.........90 .........100.........110.........120....
 
   154.....160.........170........
Predicted Secondary structure 


Query SS confidence 
























Query Sequence  SPAVLQSPQVQAKVRATLLAGIRAA
Query Conservation      
     
 












Alig confidence 
























Template Conservation   
 
 













 


  
Template Sequence  KPEANRDRIAIADWAGELLTGIYEN
Template Known Secondary structure 


SSS



T
Template Predicted Secondary structure 

Template SS confidence 
























   125....130.........140.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions