Job Description P27828 Confidence 99.29% Date Thu Jan 5 11:44:04 GMT 2012 Rank 48 Aligned Residues 367 % Identity 11% Template d2c1xa1 SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase UDPGT-like Resolution 1.9

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		2	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure								.																																																			.	.	.	.	.
Query SS confidence								.																																																			.	.	.	.	.
Query Sequence		K	V	L	T	V	F	.	G	T	R	P	E	A	I	K	M	A	P	L	V	H	A	L	A	K	D	P	F	F	E	A	K	V	C	V	T	A	Q	H	R	E	M	L	D	Q	V	L	K	L	F	S	I	V	P	D	Y	D	.	.	.	.	.	L	N	I	M	Q	P	G	Q	G	L	T	E	I	T	C	R	I	L
Query Conservation								.																																																			.	.	.	.	.
Alig confidence								.																				.																															.	.	.	.	.
Template Conservation																												.
Template Sequence		H	V	A	V	L	A	F	P	F	S	T	H	A	A	P	L	L	A	V	V	R	R	L	A	A	A	.	A	P	H	A	V	F	S	F	F	S	T	S	Q	S	N	A	S	I	F	Q	C	N	I	K	S	Y	D	I	S	D	G	V	P	E	G	Y	V	F	A	G	R	P	Q	E	D	I	E	L	F	T	R	A	A
Template Known Secondary structure										S	S	S	S															.		T	T	S																	T	T												T	T							T	T
Template Predicted Secondary structure																												.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		76	.						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																																.	.
Predicted Secondary structure				.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	G	.	.	.	.	.	L	K	P	I	L	A	E	F	K	P	D	V	V	L	V	H	G	D	T	T	T	T	L	A	T	S	L	A	A	F	Y	Q	R	I	P	V	G	H	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G
Query Conservation				.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	S	F	R	Q	G	M	V	M	A	V	A	E	T	G	R	P	V	S	C	L	V	A	D	A	F	I	W	F	A	A	D	M	A	A	E	M	G	V	A	W	L	P	F	W	T	A	G	P	N	S	L	S	T	H	V	Y	I	D	E	I	R	E	K	I	G	V	S	G	I	Q	G	R	E	D	E	L	L	N
Template Known Secondary structure																	T										T	T	S	T	T									T									S										T										S	S			T	T		T	T		B		T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	T	G	D	L	Y	S	P	W	P	E	E	A	N	R	T	L	T	G	H	L	A	M	Y	H	F	S	P	T	E	T	S	R	Q	N	L	L	R	E	N	V	A	D	S	R	I	F	I	T	G	N	T	V	I	D	A	L	L	W	V	R	D	Q	V	M	S	S	D	K	L	R	S	E	L	A	A	N	Y	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	P	G	M	S	K	V	R	F	R	D	L	Q	E	G	I	V	F	G	N	L	N	S	L	F	S	R	M	L	H	R	M	G	Q	V	L	P	K	A	T	A	V	F	I	N	S	F	E	E	L	D	D	S	L	T	N	D	L	K	S	K	L	K	T	Y	L	N	I	G	P	F	N	L	I	T	G	C	L	Q
Template Known Secondary structure		T	S	T	T		T	T		B	G	G	G	S		T	T	T	S	S	S		T	T	S													G	G	G	S	S					S	S		G	G	G												S	S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	D	P	D	K	K	M	I	L	V	T	G	H	R	R	E	S	F	G	R	G	F	E	E	I	C	H	A	L	A	D	I	A	T	T	H	Q	D	I	Q	I	V	Y	P	V	H	L	N	P	N	V	R	E	P	V	N	R	I	L	G	H	V	K	N	V	I	L	I	D	P	Q	E	Y	L	P	F	V	W	L
Query Conservation
Alig confidence																																																															.	.
Template Conservation																																																															.	.
Template Sequence		W	L	K	E	R	K	P	T	S	V	V	Y	I	S	F	G	T	V	T	T	P	P	P	A	E	V	V	A	L	S	E	A	L	E	A	S	R	V	P	F	I	W	S	L	R	D	K	A	R	V	H	L	P	E	G	F	L	E	K	T	R	.	.	G	Y	G	M	V	V	P	W	A	P	Q	A	E	V	L	A	H
Template Known Secondary structure					T	S		T	T									S	S																			T									G	G	G	G	G	G	S		T	T						T	.	.	T	T					S									T	S
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.					.	.	.	.		320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.				.	.	.	.
Predicted Secondary structure																																						.	.	.	.					.									.	.	.																		.	.	.
Query SS confidence																																						.	.	.	.					.									.	.	.																		.	.	.
Query Sequence		M	N	H	A	W	L	I	L	T	D	S	G	G	I	Q	E	E	A	P	S	L	G	K	P	V	L	V	M	R	D	T	T	E	R	P	E	.	.	.	.	A	V	T	A	.	G	T	V	R	L	V	G	T	.	.	.	D	K	Q	R	I	V	E	E	V	T	R	L	L	K	D	E	N	.	.	.	E	Y	Q	A
Query Conservation																																						.	.	.	.					.									.	.	.																		.	.	.
Alig confidence																																						.	.	.	.					.									.	.	.																		.	.	.
Template Conservation
Template Sequence		E	A	V	G	A	F	V	T	H	C	G	W	N	S	L	W	E	S	V	A	G	G	V	P	L	I	C	R	P	F	F	G	D	Q	R	L	N	G	R	M	V	E	D	V	L	E	I	G	V	R	I	E	G	G	V	F	T	K	S	G	L	M	S	C	F	D	Q	I	L	S	Q	E	K	G	K	K	L	R	E	N
Template Known Secondary structure		T	T																				T									S	T	T											T	S							G	G	G	S																S
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		349	350	.	.	.	.	.	.	.						.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure											.	.	.	.	.
Query SS confidence											.	.	.	.	.
Query Sequence		M	S	R	A	H	N	P	Y	G	.	.	.	.	.	D	G	Q	A	C	S	R	I	L	E	A	L	K	N
Query Conservation											.	.	.	.	.
Alig confidence											.	.	.	.	.
Template Conservation
Template Sequence		L	R	A	L	R	E	T	A	D	R	A	V	G	P	K	G	S	S	T	E	N	F	I	T	L	V	D	L
Template Known Secondary structure													T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions