Job Description P27828 Confidence 99.79% Date Thu Jan 5 11:44:04 GMT 2012 Rank 38 Aligned Residues 358 % Identity 14% Template d1rrva_ SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Gtf glycosyltransferase Resolution 2.00

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		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.											.	.	.
Predicted Secondary structure									.																																																												.	.	.	.	.	.	.	.	.	.
Query SS confidence									.																																																												.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	V	L	T	V	F	.	G	T	R	P	E	A	I	K	M	A	P	L	V	H	A	L	A	K	D	P	F	F	E	A	K	V	C	V	T	A	Q	H	R	E	M	L	D	Q	V	L	K	L	F	S	I	V	P	D	Y	D	L	N	I	M	Q	P	G	Q	G	.	.	.	.	.	.	.	.	.	.	L	T	E
Query Conservation									.																																																												.	.	.	.	.	.	.	.	.	.
Alig confidence									.																				.																																								.	.	.	.	.	.	.	.	.	.
Template Conservation																													.
Template Sequence		M	R	V	L	L	S	V	C	G	T	R	G	D	V	E	I	G	V	A	L	A	D	R	L	K	A	L	.	G	V	Q	T	R	M	C	A	P	P	A	A	E	E	R	L	A	E	V	G	V	P	H	V	P	V	G	L	P	Q	H	M	M	L	Q	E	G	M	P	P	P	P	P	E	E	E	Q	R	L	A	A	M
Template Known Secondary structure										S																		T	.	T									G	G	G								T							S			G	G	G				T	T	S
Template Predicted Secondary structure																													.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.											.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	C	R	I	L	E	G	L	K	P	I	L	A	E	F	K	P	D	V	V	L	V	H	G	D	T	T	T	T	L	A	T	S	L	A	A	F	Y	Q	R	I	P	V	G	H	V	E	A	G	L	R	T	G	.	.	.	.	.	.	.	.	.	.	D	L	Y	S	P	W	P	E	E	A	N	R	T	L	T	G
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.																													.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.
Template Sequence		T	V	E	M	Q	F	D	A	V	P	G	A	A	E	G	C	A	A	V	V	A	V	G	D	.	.	L	A	A	A	T	G	V	R	S	V	A	E	K	L	G	L	P	F	F	Y	S	V	P	S	P	V	Y	L	A	S	P	H	L	P	P	A	Y	D	E	P	T	T	P	G	V	T	D	I	R	V	L	W	E	E
Template Known Secondary structure														T	T	T		S								.	.															T								S	S	G	G	G	S			S	S	S				B		S				T	T
Template Predicted Secondary structure																										.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.														.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	L	A	M	Y	H	F	S	P	T	E	T	S	R	Q	N	L	L	R	E	N	V	A	D	S	R	I	F	I	T	G	N	T	V	I	D	A	L	L	W	V	R	D	Q	V	M	S	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	R	S	E	L	A	A	N	Y	P	F	I	D	P	D	K	K
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	A	R	F	A	D	R	Y	G	P	T	L	N	R	R	R	A	E	I	G	L	P	P	V	E	D	V	F	G	Y	G	H	G	E	R	P	L	L	A	A	D	P	V	L	A	P	L	Q	P	D	V	D	A	V	Q	T	G	A	W	L	L	S	D	E	R	P	L	P	P	E	L	E	A	F	L	A	A	G	S
Template Known Secondary structure																					T	T					S						T	T		S	S					S		T	T	T	S				S	S																											S	S	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	L	V	T	G	H	R	R	E	S	F	G	R	G	F	E	E	I	C	H	A	L	A	D	I	A	T	T	H	Q	D	I	Q	I	V	Y	P	V	H	L	N	P	N	V	R	E	P	V	N	R	I	L	G	H	V	K	N	V	I	L	I	D	P	Q	E	Y	L	P	F	V	W	L	M	N	H	A	W	L	I
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.																							.	.
Template Conservation																																													.	.	.	.	.	.	.	.																							.	.
Template Sequence		P	P	V	H	I	G	F	G	S	S	S	G	R	G	I	A	D	A	A	K	V	A	V	E	A	I	R	A	Q	G	R	R	V	I	L	S	R	G	W	T	E	L	V	.	.	.	.	.	.	.	.	L	P	D	D	R	D	D	C	F	A	I	D	E	V	N	F	Q	A	L	F	R	R	.	.	V	A	A	V	I
Template Known Secondary structure									T	T			S																	T	T								T	T	T	T			.	.	.	.	.	.	.	.		S				T	T					S	S							G	G	G	.	.	S	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280									.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.					.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.																	.	.	.
Query SS confidence																											.	.	.	.																	.	.	.
Query Sequence		L	T	D	S	G	G	I	Q	E	E	A	P	S	L	G	K	P	V	L	V	M	R	D	T	T	.	.	.	.	E	R	P	E	A	V	T	A	G	T	V	R	L	V	G	T	.	.	.	D	K	Q	R	I	V	E	E	V	T	R	L	L	K	D	E	N	E	Y	Q	A	M	S	R	A	H	N	P	Y	G	D	G
Query Conservation																											.	.	.	.																	.	.	.
Alig confidence																											.	.	.	.																	.	.	.														.																		.
Template Conservation																																																															.																		.
Template Sequence		H	H	G	S	A	G	T	E	H	V	A	T	R	A	G	V	P	Q	L	V	I	P	R	N	T	D	Q	P	Y	F	A	G	R	V	A	A	L	G	I	G	V	A	H	D	G	P	T	P	T	F	E	S	L	S	A	A	L	T	T	V	L	.	A	P	E	T	R	A	R	A	E	A	V	A	G	M	V	L	T	.
Template Known Secondary structure																T									S	B	T												T	S					S	S	S															T	.	S											T	T	T				.
Template Predicted Secondary structure																																																															.																		.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	C	S	R	I	L	E	A	L	K	N	N	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	A	A	A	A	A	D	L	V	L	A	A	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions