Job Description P27828 Confidence 98.67% Date Thu Jan 5 11:44:04 GMT 2012 Rank 52 Aligned Residues 309 % Identity 15% Template d1pswa_ SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase ADP-heptose LPS heptosyltransferase II Resolution 2.00

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		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																.
Query SS confidence												.																.
Query Sequence		M	K	V	L	T	V	F	G	T	R	.	P	E	A	I	K	M	A	P	L	V	H	A	L	A	K	.	D	P	F	F	E	A	K	V	C	V	T	A	Q	H	R	E	M	L	D	Q	V	L	K	L	F	S	I	V	P	D	Y	D	L	N	I	M	Q	P	G	Q	G	L	T	E	I	T	C	R	I	L	E	G	L
Query Conservation												.																.
Alig confidence												.																.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	K	I	L	V	I	G	P	S	W	V	G	D	X	X	X	S	Q	S	L	Y	R	T	L	Q	A	R	Y	P	Q	A	I	I	D	V	X	A	P	A	W	C	R	P	L	L	S	R	X	P	E	V	N	E	A	I	P	X	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	E	R	R	K	L
Template Known Secondary structure										S	S																		S	T	T									G	G	G					T	T		T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.																.	60	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	I	L	A	E	F	K	P	D	V	V	L	V	H	G	D	T	T	T	T	L	A	T	S	L	A	A	F	Y	Q	R	I	P	V	G	H	V	E	A	G	L	R	T	G	D	L	Y	S	P	W	P	E	E	A	N	R	T	L	T	G	H	L	A	M	Y	H	F	S	P	T	E	T	S	R	Q	N	L	L	R
Query Conservation
Alig confidence																.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	H	S	L	R	E	K	R	Y	D	R	A	Y	V	.	.	.	L	P	N	S	F	K	S	A	L	V	P	L	F	A	G	I	P	H	R	T	G	W	R	G	E	X	R	Y	G	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	V	R	V	L	D	K	E	A	W	P	L	X	V	E
Template Known Secondary structure					T	T	T	T	T		S					.	.	.		S			S	G	G	G						T	T		S							T	T	T		T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							T	T	T			S
Template Predicted Secondary structure																.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		E	N	V	A	D	S	R	I	F	I	T	G	N	T	V	I	D	A	L	L	W	V	R	D	Q	V	M	S	S	D	K	L	R	S	E	L	A	A	N	Y	P	F	I	D	P	D	K	K	M	I	L	V	T	G	H	R	R	E	S	F	G	R	G	.	.	F	E	E	I	C	H	A	L	A	D	I	A	T	T	H
Query Conservation																																																																	.	.
Alig confidence																																																																	.	.															.
Template Conservation																																																																																	.
Template Sequence		R	Y	I	A	L	A	Y	D	K	G	I	X	R	T	A	Q	D	L	P	Q	P	L	L	W	P	Q	L	Q	V	S	E	G	E	K	S	Y	T	C	N	Q	F	S	L	S	S	E	R	P	X	I	G	F	C	P	G	A	E	F	G	P	A	K	R	W	P	H	Y	H	Y	A	E	L	A	K	Q	L	I	D	E	.
Template Known Secondary structure						T	T	S		G	G	G		S	S	G	G	G	S		S	S																				T	T			S	S	S										T	T		G	G	G	S																T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.				.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		Q	D	I	Q	I	V	Y	P	V	H	L	N	P	N	V	R	E	P	V	N	R	I	L	G	H	V	.	.	.	K	N	V	I	L	I	D	P	Q	E	Y	L	P	F	V	W	L	M	N	H	A	W	L	I	L	T	D	S	G	G	I	Q	E	E	A	P	S	L	G	K	P	V	L	V	M	R	D	T	T	E	R
Query Conservation																												.	.	.
Alig confidence																												.	.	.
Template Conservation
Template Sequence		G	Y	Q	V	V	L	F	G	S	A	K	D	H	E	A	G	N	E	I	L	A	A	L	N	T	E	Q	Q	A	W	C	R	N	L	A	G	E	T	Q	L	D	Q	A	V	I	L	I	A	A	C	K	A	I	V	T	N	D	S	G	L	X	H	V	A	A	A	L	N	R	P	L	V	A	L	Y	G	P	S	S	P
Template Known Secondary structure		T									G	G	G									T	T	S						T	T					T	T	T	S											T	S	S						S	S									T	T								S	S	S		T
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		314	.	.	.	.	.	320		.	.	.	.	.														.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure									.						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	A	V	T	A	G	.	T	V	R	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	D	K	Q	R	I	V	E	E	V	T	R	L	L	K	D	E	N
Query Conservation									.						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	T	P	P	L	S	H	K	A	R	V	I	R	L	I	T	G	E	G	Y	H	Q	S	L	I	D	I	T	P	Q	R	V	L	E	E	L	N	A	L	L	L	Q	E	E
Template Known Secondary structure		T	S	S					T	T						S	S											T	S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions