Job Description P27828 Confidence 100.00% Date Thu Jan 5 11:44:04 GMT 2012 Rank 7 Aligned Residues 351 % Identity 15% Template c3okaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:gdp-mannose-dependent alpha-(1-6)-phosphatidylinositol PDBTitle: crystal structure of corynebacterium glutamicum pimb' in complex with2 gdp-man (triclinic crystal form) Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure											.																.	.	.
Query SS confidence											.																.	.	.
Query Sequence		K	V	L	T	V	F	G	T	R	.	P	E	A	I	K	M	A	P	L	V	H	A	L	A	K	.	.	.	D	P	F	F	E	A	K	V	C	V	T	A	Q	H	R	E	M	L	D	Q	V	L	K	L	F	S	I	V	P	D	Y	D	L	N	I	M	Q	P	G	Q	G	L	T	E	I	T	C	R	I	L	E	G
Query Conservation											.																.	.	.
Alig confidence											.																.	.	.												.	.	.																																.	.	.	.	.
Template Conservation																																									.	.	.																																.	.	.	.	.
Template Sequence		K	T	L	V	V	T	N	D	F	P	P	R	I	G	G	I	Q	S	Y	L	R	D	F	I	A	T	Q	D	P	E	S	I	V	V	F	A	S	T	Q	.	.	.	N	A	E	E	A	H	A	Y	D	K	T	L	D	Y	E	V	I	R	W	P	R	S	V	M	L	P	T	P	T	T	A	.	.	.	.	.	H	A
Template Known Secondary structure								S			T	T	S		S												T	S		G	G	G								S	.	.	.										T	T		S	S						S	S	S	S									.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.																																.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.						.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	P	I	L	A	E	F	K	P	D	V	V	L	V	H	G	D	T	T	T	T	L	A	T	S	L	A	A	F	Y	Q	R	I	P	V	G	H	V	E	A	G	L	R	T	G	D	L	Y	S	P	W	P	E	E	A	N	R	T	L	T	G	H	L	A	M	Y	H	F	S	P	T	E	T	S	R	Q	N	L	L
Query Conservation
Alig confidence																																																																	.
Template Conservation																																																																	.
Template Sequence		M	A	E	I	I	R	E	R	E	I	D	N	V	W	F	G	A	A	A	P	L	A	L	M	A	G	T	A	K	Q	A	G	A	S	K	V	I	A	S	T	H	G	H	E	V	G	W	S	M	L	P	G	S	R	Q	S	L	R	K	I	G	T	E	.	V	D	V	L	T	Y	I	S	Q	Y	T	L	R	R	F	K
Template Known Secondary structure									T	T		S					S	S		T	T	G	G	G	G							T	T		S								S		S	S	S	T	T			T	T												.		S					S									T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	N	V	A	D	S	R	I	F	I	T	G	N	T	V	I	D	A	L	L	W	V	R	D	Q	V	M	S	S	D	K	L	R	S	E	L	A	A	N	Y	P	F	I	D	P	D	K	K	M	I	L	V	T	G	H	R	R	E	S	F	G	R	G	F	E	E	I	C	H	A	L	A	D	I	A	T	T	H	Q
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		S	A	F	G	S	H	P	T	F	E	H	L	P	S	.	.	.	.	.	.	.	.	G	V	D	V	K	R	F	T	P	A	T	P	E	D	K	S	A	T	R	K	K	L	G	F	T	D	T	T	P	V	I	A	C	N	S	R	L	V	P	R	K	G	Q	D	S	L	I	K	A	M	P	Q	V	I	A	A	R	P
Template Known Secondary structure		T	T	T		S	S	S								.	.	.	.	.	.	.	.		B		T	T	T	S																T			T	T								S		S	S	G	G	G																	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170									.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.													.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	Q	I	V	Y	P	V	H	L	N	P	N	V	R	E	P	V	N	R	I	L	G	H	V	K	N	V	I	L	I	D	P	Q	E	Y	L	P	F	V	W	L	M	N	H	A	W	L	I	L	.	.	.	.	.	.	.	.	.	.	.	.	T	D	S	G	G	I	Q	E	E	A	P	S	L	G	K	P	V	L
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.
Template Sequence		D	A	Q	L	L	I	V	G	S	G	R	Y	E	S	T	L	R	R	L	A	T	D	V	S	.	Q	N	V	K	F	L	G	R	L	E	Y	Q	D	M	I	N	T	L	A	A	A	D	I	F	A	M	P	A	R	T	R	G	G	G	L	D	V	E	G	L	G	I	V	Y	L	E	A	Q	A	C	G	V	P	V	I
Template Known Secondary structure		T										T	T								T	G	G	G	G	.	G	G						S														S									B	G	G	G	T	B				S										T	T
Template Predicted Secondary structure																										.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.						.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																						.																													.	.	.	.	.
Query SS confidence																						.																													.	.	.	.	.
Query Sequence		V	M	R	D	T	T	E	R	P	E	A	V	T	A	G	T	V	R	L	V	.	G	T	D	K	Q	R	I	V	E	E	V	T	R	L	L	K	D	E	N	E	Y	Q	A	M	S	R	A	H	.	.	.	.	.	N	P	Y	G	D	G	Q	A	C	S	R	I	L	E	A	L	K	N
Query Conservation																						.																													.	.	.	.	.
Alig confidence				.																		.																													.	.	.	.	.
Template Conservation				.
Template Sequence		A	G	.	T	S	G	G	A	P	E	T	V	T	P	A	T	G	L	V	V	E	G	S	D	V	D	K	L	S	E	L	L	I	E	L	L	D	D	P	I	R	R	A	A	M	G	A	A	G	R	A	H	V	E	A	E	W	S	W	E	I	M	G	E	R	L	T	N	I	L	Q	S
Template Known Secondary structure				.	S	S	T	T	G	G	G	G			T	T	T						T	T														T																				T	B														S
Template Predicted Secondary structure				.
Template SS confidence
		308	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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