Return to main results Retrieve Phyre Job Id

Job DescriptionP27828
Confidence49.10%DateThu Jan 5 11:44:04 GMT 2012
Rank206Aligned Residues92
% Identity21%Templatec3m2tA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:probable dehydrogenase; PDBTitle: the crystal structure of dehydrogenase from chromobacterium2 violaceum
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  MKVLTVFGTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILEGLKP
Query Conservation 



 
 
        
 
   
    
 

 

                                              
Alig confidence 






...
























.




















...................



Template Conservation 






... 
          
       



 .
                    ...................    
Template Sequence  IKVGLVG. . . IGAQXQENLLPSLLQXQDIRIVAAC. DSDLERARRVHRFISDIPVLD. . . . . . . . . . . . . . . . . . . NVPA
Template Known Secondary structure 
...
STT
TT.
SSGGGGGTS
S

S...................S
Template Predicted Secondary structure 
...






.







...................
Template SS confidence 















































































   4.....10 .........20.........30..... ....40.........50...... ...60
 
   81........90.........100.........110.....
Predicted Secondary structure 












Query SS confidence 


































Query Sequence  ILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGH
Query Conservation   
    

 
                         
Alig confidence 


































Template Conservation 

    

 
 
 

   
      

  




 
Template Sequence  XLNQVPLDAVVXAGPPQLHFEXGLLAXSKGVNVFV
Template Known Secondary structure  S

S
S
TT
Template Predicted Secondary structure 
















Template SS confidence 


































   61........70.........80.........90.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions